Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RPH3ALQ9UNE2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3ALQ9UNE2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3ALQ9UNE2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3ALQ9UNE2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RPH3ALQ9UNE2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RPH3ALQ9UNE2 TCF3P1-201ENST00000423021 1937 ntBASIC15.6■□□□□ 0.09
RPH3ALQ9UNE2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3ALQ9UNE2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.6■□□□□ 0.09
RPH3ALQ9UNE2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3ALQ9UNE2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3ALQ9UNE2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.6■□□□□ 0.09
RPH3ALQ9UNE2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RPH3ALQ9UNE2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 AC105233.4-201ENST00000642045 216 ntBASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 AP004607.4-201ENST00000530158 1459 ntBASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3ALQ9UNE2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RPH3ALQ9UNE2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RPH3ALQ9UNE2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.58■□□□□ 0.09
RPH3ALQ9UNE2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RPH3ALQ9UNE2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RPH3ALQ9UNE2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RPH3ALQ9UNE2 SMG8-203ENST00000578922 2178 ntBASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 AC131281.2-201ENST00000520478 145 ntBASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 IGHV3-19-201ENST00000521488 291 ntBASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 AC061975.6-201ENST00000579045 1553 ntBASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3ALQ9UNE2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RPH3ALQ9UNE2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPH3ALQ9UNE2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RPH3ALQ9UNE2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms