Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 Z82202.1-201ENST00000623446 1880 ntBASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 NEFHP1-201ENST00000412845 2629 ntBASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 TSPY9P-201ENST00000440215 945 ntBASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 TSPY11P-201ENST00000442607 1045 ntBASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 MIR4787-201ENST00000607364 84 ntBASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 AC092171.4-201ENST00000609130 632 ntBASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MAP1LC3AQ9H492 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MAP1LC3AQ9H492 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 MIR6724-1-201ENST00000616420 92 ntBASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 MIR6724-2-201ENST00000616483 92 ntBASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 MIR6724-4-201ENST00000617390 92 ntBASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 MIR6724-3-201ENST00000622482 92 ntBASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
MAP1LC3AQ9H492 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MAP1LC3AQ9H492 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
MAP1LC3AQ9H492 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MAP1LC3AQ9H492 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
MAP1LC3AQ9H492 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MAP1LC3AQ9H492 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
MAP1LC3AQ9H492 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms