Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 AC011676.5-201ENST00000624864 2660 ntBASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 LINC00896-202ENST00000609602 2128 ntBASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CYSTM1Q9H1C7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CYSTM1Q9H1C7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC11.71□□□□□ -0.54
CYSTM1Q9H1C7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC11.71□□□□□ -0.54
CYSTM1Q9H1C7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CYSTM1Q9H1C7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC11.71□□□□□ -0.54
CYSTM1Q9H1C7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CYSTM1Q9H1C7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CYSTM1Q9H1C7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CYSTM1Q9H1C7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CYSTM1Q9H1C7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CYSTM1Q9H1C7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 EFTUD1P1-204ENST00000560401 1798 ntBASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 NKILA-202ENST00000614771 2598 ntBASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC11.7□□□□□ -0.54
CYSTM1Q9H1C7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms