Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.99■□□□□ 0.47
BBS1Q8NFJ9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BBS1Q8NFJ9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BBS1Q8NFJ9 AC123595.1-201ENST00000440769 1046 ntBASIC17.99■□□□□ 0.47
BBS1Q8NFJ9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.99■□□□□ 0.47
BBS1Q8NFJ9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.99■□□□□ 0.47
BBS1Q8NFJ9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.99■□□□□ 0.47
BBS1Q8NFJ9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BBS1Q8NFJ9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BBS1Q8NFJ9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BBS1Q8NFJ9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BBS1Q8NFJ9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BBS1Q8NFJ9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BBS1Q8NFJ9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.99■□□□□ 0.47
BBS1Q8NFJ9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 SLC7A5P1-201ENST00000568957 537 ntBASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BBS1Q8NFJ9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 YBX1P1-201ENST00000445822 960 ntBASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 KRT18P14-201ENST00000534205 1250 ntBASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.97■□□□□ 0.47
BBS1Q8NFJ9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 CDV3P1-201ENST00000471403 739 ntBASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 KRT18P61-201ENST00000585825 1298 ntBASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BBS1Q8NFJ9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
BBS1Q8NFJ9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
BBS1Q8NFJ9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BBS1Q8NFJ9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
BBS1Q8NFJ9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BBS1Q8NFJ9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BBS1Q8NFJ9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BBS1Q8NFJ9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
BBS1Q8NFJ9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.95■□□□□ 0.46
BBS1Q8NFJ9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.95■□□□□ 0.46
BBS1Q8NFJ9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms