Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.84■□□□□ 0.77
YTHDF3Q7Z739 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.83■□□□□ 0.77
YTHDF3Q7Z739 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
YTHDF3Q7Z739 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
YTHDF3Q7Z739 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
YTHDF3Q7Z739 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.83■□□□□ 0.77
YTHDF3Q7Z739 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
YTHDF3Q7Z739 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
YTHDF3Q7Z739 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
YTHDF3Q7Z739 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.83■□□□□ 0.77
YTHDF3Q7Z739 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
YTHDF3Q7Z739 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
YTHDF3Q7Z739 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.83■□□□□ 0.76
YTHDF3Q7Z739 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.83■□□□□ 0.76
YTHDF3Q7Z739 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
YTHDF3Q7Z739 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.83■□□□□ 0.76
YTHDF3Q7Z739 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.83■□□□□ 0.76
YTHDF3Q7Z739 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
YTHDF3Q7Z739 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
YTHDF3Q7Z739 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
YTHDF3Q7Z739 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
YTHDF3Q7Z739 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.82■□□□□ 0.76
YTHDF3Q7Z739 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
YTHDF3Q7Z739 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
YTHDF3Q7Z739 AC133637.1-201ENST00000624115 1537 ntBASIC19.82■□□□□ 0.76
YTHDF3Q7Z739 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.82■□□□□ 0.76
YTHDF3Q7Z739 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.82■□□□□ 0.76
YTHDF3Q7Z739 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.82■□□□□ 0.76
YTHDF3Q7Z739 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
YTHDF3Q7Z739 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.82■□□□□ 0.76
YTHDF3Q7Z739 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
YTHDF3Q7Z739 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
YTHDF3Q7Z739 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
YTHDF3Q7Z739 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
YTHDF3Q7Z739 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 AC068880.1-201ENST00000507289 2297 ntBASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 UNC93B3-201ENST00000308076 687 ntBASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
YTHDF3Q7Z739 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
YTHDF3Q7Z739 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.79■□□□□ 0.76
YTHDF3Q7Z739 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
YTHDF3Q7Z739 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
YTHDF3Q7Z739 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
YTHDF3Q7Z739 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
YTHDF3Q7Z739 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
YTHDF3Q7Z739 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.79■□□□□ 0.76
YTHDF3Q7Z739 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms