Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 CROCCP3-202ENST00000420820 1947 ntBASIC18.85■□□□□ 0.61
LPCAT4Q643R3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 TSPY9P-201ENST00000440215 945 ntBASIC18.85■□□□□ 0.61
LPCAT4Q643R3 TSPY11P-201ENST00000442607 1045 ntBASIC18.85■□□□□ 0.61
LPCAT4Q643R3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 DPP3P2-201ENST00000416030 1696 ntBASIC18.85■□□□□ 0.61
LPCAT4Q643R3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 MIR6724-1-201ENST00000616420 92 ntBASIC18.84■□□□□ 0.61
LPCAT4Q643R3 MIR6724-2-201ENST00000616483 92 ntBASIC18.84■□□□□ 0.61
LPCAT4Q643R3 MIR6724-4-201ENST00000617390 92 ntBASIC18.84■□□□□ 0.61
LPCAT4Q643R3 MIR6724-3-201ENST00000622482 92 ntBASIC18.84■□□□□ 0.61
LPCAT4Q643R3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 AL390961.4-201ENST00000623958 2535 ntBASIC18.84■□□□□ 0.61
LPCAT4Q643R3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LPCAT4Q643R3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
LPCAT4Q643R3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.83■□□□□ 0.61
LPCAT4Q643R3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.83■□□□□ 0.61
LPCAT4Q643R3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
LPCAT4Q643R3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.83■□□□□ 0.61
LPCAT4Q643R3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LPCAT4Q643R3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.83■□□□□ 0.61
LPCAT4Q643R3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LPCAT4Q643R3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
LPCAT4Q643R3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LPCAT4Q643R3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LPCAT4Q643R3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
LPCAT4Q643R3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LPCAT4Q643R3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LPCAT4Q643R3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.83■□□□□ 0.6
LPCAT4Q643R3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LPCAT4Q643R3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LPCAT4Q643R3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.83■□□□□ 0.6
LPCAT4Q643R3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LPCAT4Q643R3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.83■□□□□ 0.6
LPCAT4Q643R3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LPCAT4Q643R3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms