Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AL121603.2-201ENST00000557373 2117 ntBASIC21.95■■□□□ 1.1
TRIM71Q2Q1W2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM71Q2Q1W2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM71Q2Q1W2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM71Q2Q1W2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.95■■□□□ 1.1
TRIM71Q2Q1W2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 NIFKP9-201ENST00000419265 221 ntBASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 KRT8P20-201ENST00000423953 1409 ntBASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM71Q2Q1W2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM71Q2Q1W2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM71Q2Q1W2 MIR1238-201ENST00000408483 83 ntBASIC21.93■■□□□ 1.1
TRIM71Q2Q1W2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
TRIM71Q2Q1W2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.93■■□□□ 1.1
TRIM71Q2Q1W2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.93■■□□□ 1.1
TRIM71Q2Q1W2 KSR1P1-201ENST00000446298 240 ntBASIC21.93■■□□□ 1.1
TRIM71Q2Q1W2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.93■■□□□ 1.1
TRIM71Q2Q1W2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
TRIM71Q2Q1W2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.93■■□□□ 1.1
TRIM71Q2Q1W2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.93■■□□□ 1.1
TRIM71Q2Q1W2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.93■■□□□ 1.1
TRIM71Q2Q1W2 AC092865.7-201ENST00000641832 219 ntBASIC21.93■■□□□ 1.1
TRIM71Q2Q1W2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 CR392000.1-201ENST00000624770 1228 ntBASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.92■■□□□ 1.1
TRIM71Q2Q1W2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM71Q2Q1W2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM71Q2Q1W2 CYP2D8P-201ENST00000433633 1490 ntBASIC21.91■■□□□ 1.1
TRIM71Q2Q1W2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM71Q2Q1W2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.91■■□□□ 1.1
TRIM71Q2Q1W2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM71Q2Q1W2 KRT18P35-201ENST00000510488 1269 ntBASIC21.91■■□□□ 1.1
TRIM71Q2Q1W2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.91■■□□□ 1.1
TRIM71Q2Q1W2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.91■■□□□ 1.1
TRIM71Q2Q1W2 FITM1-202ENST00000559294 800 ntBASIC21.91■■□□□ 1.1
TRIM71Q2Q1W2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM71Q2Q1W2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM71Q2Q1W2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.91■■□□□ 1.1
TRIM71Q2Q1W2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.91■■□□□ 1.1
TRIM71Q2Q1W2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 AL390955.1-201ENST00000428694 934 ntBASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 AC005363.2-201ENST00000618631 242 ntBASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 AC010947.1-201ENST00000623454 693 ntBASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 PLK5-205ENST00000642079 1969 ntBASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM71Q2Q1W2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM71Q2Q1W2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM71Q2Q1W2 KRT8P17-201ENST00000453110 1448 ntBASIC21.89■■□□□ 1.1
TRIM71Q2Q1W2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM71Q2Q1W2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM71Q2Q1W2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM71Q2Q1W2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
TRIM71Q2Q1W2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms