Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.07■■□□□ 1.66e-8■■□□□ 14.3
SRSF1Q07955 OPN3-205ENST00000478849 880 ntTSL 324.46■■□□□ 1.516e-8■■□□□ 14.3
SRSF1Q07955 OPN3-206ENST00000490673 1816 ntTSL 1 (best)21.11■□□□□ 0.976e-8■■□□□ 14.3
SRSF1Q07955 OPN3-204ENST00000469376 1961 ntTSL 1 (best)20.44■□□□□ 0.866e-8■■□□□ 14.3
SRSF1Q07955 BET1L-205ENST00000479463 684 ntTSL 319.85■□□□□ 0.776e-8■■□□□ 14.3
SRSF1Q07955 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.16■□□□□ 0.666e-8■■□□□ 14.3
SRSF1Q07955 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.13■□□□□ 0.656e-8■■□□□ 14.3
SRSF1Q07955 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.77■□□□□ 0.446e-8■■□□□ 14.3
SRSF1Q07955 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.366e-8■■□□□ 14.3
SRSF1Q07955 PNCK-209ENST00000423545 448 ntTSL 416.92■□□□□ 0.36e-8■■□□□ 14.3
SRSF1Q07955 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.76■□□□□ 0.276e-8■■□□□ 14.3
SRSF1Q07955 PNCK-210ENST00000425526 725 ntTSL 515.17■□□□□ 0.026e-8■■□□□ 14.3
SRSF1Q07955 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.326e-8■■□□□ 14.3
SRSF1Q07955 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.2□□□□□ -0.466e-8■■□□□ 14.3
SRSF1Q07955 CHML-201ENST00000366553 7594 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.946e-8■■□□□ 14.3
SRSF1Q07955 OPN3-203ENST00000463155 806 ntTSL 37.05□□□□□ -1.286e-8■■□□□ 14.3
SRSF1Q07955 U2SURP-211ENST00000488497 3557 ntTSL 1 (best)6.49□□□□□ -1.376e-8■■□□□ 14.3
SRSF1Q07955 RPS16P5-201ENST00000406501 404 ntBASIC5.43□□□□□ -1.546e-8■■□□□ 14.3
SRSF1Q07955 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.8□□□□□ -1.646e-8■■□□□ 14.3
SRSF1Q07955 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.826e-8■■□□□ 14.3
SRSF1Q07955 U2SURP-203ENST00000463563 4364 ntTSL 22.41□□□□□ -2.026e-8■■□□□ 14.3
SRSF1Q07955 TTLL3-208ENST00000426827 756 ntTSL 412.04□□□□□ -0.487e-8■■□□□ 14.3
SRSF1Q07955 TTLL3-204ENST00000417065 565 ntTSL 49.84□□□□□ -0.837e-8■■□□□ 14.3
SRSF1Q07955 TTLL3-207ENST00000422738 545 ntTSL 48.73□□□□□ -1.017e-8■■□□□ 14.3
SRSF1Q07955 TTLL3-222ENST00000459758 555 ntTSL 48.73□□□□□ -1.017e-8■■□□□ 14.3
SRSF1Q07955 SUN1-212ENST00000429178 3701 ntTSL 1 (best)8.39□□□□□ -1.072e-6■■□□□ 14.3
SRSF1Q07955 PGGHG-206ENST00000476372 2879 ntTSL 212.54□□□□□ -0.42e-7■■□□□ 14.3
SRSF1Q07955 ATG4B-221ENST00000483778 1103 ntTSL 317.53■□□□□ 0.46e-6■■□□□ 14.3
SRSF1Q07955 ATG4B-216ENST00000475195 762 ntTSL 215.27■□□□□ 0.046e-6■■□□□ 14.3
SRSF1Q07955 ATG4B-203ENST00000400772 625 ntTSL 415.05■□□□□ -06e-6■■□□□ 14.3
SRSF1Q07955 ATG4B-209ENST00000425239 807 ntTSL 214.92□□□□□ -0.026e-6■■□□□ 14.3
SRSF1Q07955 ATG4B-202ENST00000400771 663 ntTSL 514.55□□□□□ -0.086e-6■■□□□ 14.3
SRSF1Q07955 ATG4B-215ENST00000468018 721 ntTSL 514.2□□□□□ -0.146e-6■■□□□ 14.3
SRSF1Q07955 ATG4B-223ENST00000493618 899 ntTSL 514.09□□□□□ -0.156e-6■■□□□ 14.3
SRSF1Q07955 ATG4B-214ENST00000465399 581 ntTSL 213.99□□□□□ -0.176e-6■■□□□ 14.3
SRSF1Q07955 ATG4B-218ENST00000479554 556 ntTSL 413.72□□□□□ -0.216e-6■■□□□ 14.3
SRSF1Q07955 ATG4B-208ENST00000419606 553 ntTSL 411.28□□□□□ -0.66e-6■■□□□ 14.3
SRSF1Q07955 ATG4B-212ENST00000430617 623 ntTSL 310.82□□□□□ -0.686e-6■■□□□ 14.3
SRSF1Q07955 ATG4B-207ENST00000415107 356 ntTSL 510.67□□□□□ -0.76e-6■■□□□ 14.3
SRSF1Q07955 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.318e-7■■□□□ 14.2
SRSF1Q07955 SEPT9-214ENST00000586456 545 ntTSL 219.06■□□□□ 0.646e-8■■□□□ 14.2
SRSF1Q07955 SEPT9-245ENST00000592481 1291 ntTSL 517.93■□□□□ 0.466e-8■■□□□ 14.2
SRSF1Q07955 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.1■□□□□ 0.336e-8■■□□□ 14.2
SRSF1Q07955 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.316e-8■■□□□ 14.2
SRSF1Q07955 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.016e-8■■□□□ 14.2
SRSF1Q07955 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.296e-8■■□□□ 14.2
SRSF1Q07955 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.456e-8■■□□□ 14.2
SRSF1Q07955 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.566e-8■■□□□ 14.2
SRSF1Q07955 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.3□□□□□ -0.66e-8■■□□□ 14.2
SRSF1Q07955 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.796e-8■■□□□ 14.2
SRSF1Q07955 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC10□□□□□ -0.816e-8■■□□□ 14.2
SRSF1Q07955 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC9.56□□□□□ -0.886e-8■■□□□ 14.2
SRSF1Q07955 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC9.38□□□□□ -0.916e-8■■□□□ 14.2
SRSF1Q07955 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC9.33□□□□□ -0.926e-8■■□□□ 14.2
SRSF1Q07955 SEPT9-225ENST00000589250 527 ntTSL 28.74□□□□□ -1.016e-8■■□□□ 14.2
SRSF1Q07955 PAXX-206ENST00000492564 701 ntTSL 319.18■□□□□ 0.665e-6■■□□□ 14.2
SRSF1Q07955 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.834e-6■■□□□ 14.2
SRSF1Q07955 HNRNPLL-211ENST00000498516 655 ntTSL 322.36■■□□□ 1.179e-12■■□□□ 14.2
SRSF1Q07955 LARP1-211ENST00000521577 817 ntTSL 522.27■■□□□ 1.163e-8■■□□□ 14.2
SRSF1Q07955 PHF14-206ENST00000476009 1044 ntTSL 317.54■□□□□ 0.43e-8■■□□□ 14.2
SRSF1Q07955 PHF14-214ENST00000521747 2479 ntTSL 217.35■□□□□ 0.373e-8■■□□□ 14.2
SRSF1Q07955 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.28■□□□□ 0.369e-12■■□□□ 14.2
SRSF1Q07955 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.87■□□□□ 0.299e-12■■□□□ 14.2
SRSF1Q07955 PHF14-202ENST00000423760 2627 ntTSL 216.4■□□□□ 0.223e-8■■□□□ 14.2
SRSF1Q07955 MYBBP1A-206ENST00000572759 588 ntTSL 315.86■□□□□ 0.133e-8■■□□□ 14.2
SRSF1Q07955 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.67■□□□□ 0.19e-12■■□□□ 14.2
SRSF1Q07955 MYBBP1A-211ENST00000574547 1607 ntTSL 1 (best)15.66■□□□□ 0.13e-8■■□□□ 14.2
SRSF1Q07955 MYBBP1A-205ENST00000571368 1995 ntTSL 214.41□□□□□ -0.13e-8■■□□□ 14.2
SRSF1Q07955 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.87□□□□□ -0.199e-12■■□□□ 14.2
SRSF1Q07955 LARP1-215ENST00000524248 2128 ntTSL 513.66□□□□□ -0.223e-8■■□□□ 14.2
SRSF1Q07955 MYBBP1A-210ENST00000574167 746 ntTSL 312.57□□□□□ -0.43e-8■■□□□ 14.2
SRSF1Q07955 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.47□□□□□ -0.419e-12■■□□□ 14.2
SRSF1Q07955 PHF14-210ENST00000490957 4058 ntTSL 512.03□□□□□ -0.483e-8■■□□□ 14.2
SRSF1Q07955 MYBBP1A-212ENST00000574934 1941 ntTSL 211.71□□□□□ -0.533e-8■■□□□ 14.2
SRSF1Q07955 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.563e-8■■□□□ 14.2
SRSF1Q07955 MYBBP1A-209ENST00000573723 613 ntTSL 511.46□□□□□ -0.573e-8■■□□□ 14.2
SRSF1Q07955 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.31□□□□□ -0.63e-8■■□□□ 14.2
SRSF1Q07955 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.24□□□□□ -0.619e-12■■□□□ 14.2
SRSF1Q07955 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.653e-8■■□□□ 14.2
SRSF1Q07955 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.669e-12■■□□□ 14.2
SRSF1Q07955 LARP1-203ENST00000518194 450 ntTSL 510.33□□□□□ -0.763e-8■■□□□ 14.2
SRSF1Q07955 ABCF1-203ENST00000441867 1074 ntTSL 59.74□□□□□ -0.859e-12■■□□□ 14.2
SRSF1Q07955 HNRNPLL-207ENST00000425682 570 ntTSL 39.53□□□□□ -0.889e-12■■□□□ 14.2
SRSF1Q07955 MYBBP1A-202ENST00000381556 4104 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.023e-8■■□□□ 14.2
SRSF1Q07955 ABCF1-201ENST00000326195 3481 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.049e-12■■□□□ 14.2
SRSF1Q07955 ABCF1-205ENST00000475993 2860 ntTSL 1 (best)8.45□□□□□ -1.069e-12■■□□□ 14.2
SRSF1Q07955 MYBBP1A-207ENST00000573116 3795 ntAPPRIS ALT2 TSL 1 (best)8.29□□□□□ -1.083e-8■■□□□ 14.2
SRSF1Q07955 ABCF1-202ENST00000376545 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.119e-12■■□□□ 14.2
SRSF1Q07955 LARP1-213ENST00000523163 843 ntTSL 57.42□□□□□ -1.223e-8■■□□□ 14.2
SRSF1Q07955 LARP1-210ENST00000519931 569 ntTSL 46.5□□□□□ -1.373e-8■■□□□ 14.2
SRSF1Q07955 HNRNPLL-201ENST00000272249 2190 ntTSL 25.52□□□□□ -1.539e-12■■□□□ 14.2
SRSF1Q07955 RAB18-206ENST00000490236 730 ntTSL 513.2□□□□□ -0.32e-6■■□□□ 14.2
SRSF1Q07955 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.072e-6■■□□□ 14.2
SRSF1Q07955 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.12e-6■■□□□ 14.2
SRSF1Q07955 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.332e-6■■□□□ 14.2
SRSF1Q07955 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.642e-6■■□□□ 14.2
SRSF1Q07955 ARFGAP1-219ENST00000524192 980 ntTSL 214.54□□□□□ -0.082e-6■■□□□ 14.2
SRSF1Q07955 ARFGAP1-223ENST00000550188 572 ntTSL 511.06□□□□□ -0.642e-6■■□□□ 14.2
SRSF1Q07955 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.96□□□□□ -0.344e-6■■□□□ 14.2
SRSF1Q07955 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.534e-6■■□□□ 14.2
Retrieved 100 of 14,836 protein–RNA pairs in 107.1 ms