Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX2-5P52952 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NKX2-5P52952 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NKX2-5P52952 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NKX2-5P52952 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NKX2-5P52952 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.1■□□□□ 0.33
NKX2-5P52952 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NKX2-5P52952 AC060814.1-201ENST00000554326 538 ntBASIC17.1■□□□□ 0.33
NKX2-5P52952 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NKX2-5P52952 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX2-5P52952 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX2-5P52952 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NKX2-5P52952 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX2-5P52952 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NKX2-5P52952 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NKX2-5P52952 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NKX2-5P52952 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX2-5P52952 AC084018.2-201ENST00000613093 2607 ntBASIC17.1■□□□□ 0.33
NKX2-5P52952 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.1■□□□□ 0.33
NKX2-5P52952 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.1■□□□□ 0.33
NKX2-5P52952 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NKX2-5P52952 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX2-5P52952 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NKX2-5P52952 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NKX2-5P52952 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.09■□□□□ 0.33
NKX2-5P52952 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NKX2-5P52952 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX2-5P52952 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NKX2-5P52952 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NKX2-5P52952 HCG11-201ENST00000411553 5696 ntBASIC17.09■□□□□ 0.33
NKX2-5P52952 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NKX2-5P52952 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NKX2-5P52952 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX2-5P52952 AC092720.2-201ENST00000602388 1665 ntBASIC17.09■□□□□ 0.33
NKX2-5P52952 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.09■□□□□ 0.33
NKX2-5P52952 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.09■□□□□ 0.33
NKX2-5P52952 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.09■□□□□ 0.33
NKX2-5P52952 AL354751.1-201ENST00000412768 1863 ntBASIC17.09■□□□□ 0.33
NKX2-5P52952 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.09■□□□□ 0.33
NKX2-5P52952 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NKX2-5P52952 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX2-5P52952 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.09■□□□□ 0.33
NKX2-5P52952 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.09■□□□□ 0.33
NKX2-5P52952 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX2-5P52952 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX2-5P52952 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX2-5P52952 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX2-5P52952 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NKX2-5P52952 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NKX2-5P52952 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NKX2-5P52952 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.08■□□□□ 0.33
NKX2-5P52952 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NKX2-5P52952 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NKX2-5P52952 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.08■□□□□ 0.32
NKX2-5P52952 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.08■□□□□ 0.32
NKX2-5P52952 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-5P52952 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.08■□□□□ 0.32
NKX2-5P52952 DUX4L4-201ENST00000566884 1269 ntBASIC17.08■□□□□ 0.32
NKX2-5P52952 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.08■□□□□ 0.32
NKX2-5P52952 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NKX2-5P52952 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NKX2-5P52952 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.08■□□□□ 0.32
NKX2-5P52952 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.08■□□□□ 0.32
NKX2-5P52952 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-5P52952 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-5P52952 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.08■□□□□ 0.32
NKX2-5P52952 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-5P52952 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.08■□□□□ 0.32
NKX2-5P52952 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-5P52952 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-5P52952 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-5P52952 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX2-5P52952 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-5P52952 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX2-5P52952 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX2-5P52952 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-5P52952 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-5P52952 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NKX2-5P52952 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-5P52952 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-5P52952 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-5P52952 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX2-5P52952 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-5P52952 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-5P52952 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.07■□□□□ 0.32
NKX2-5P52952 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NKX2-5P52952 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-5P52952 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NKX2-5P52952 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-5P52952 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NKX2-5P52952 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.07■□□□□ 0.32
NKX2-5P52952 AC004448.1-201ENST00000458332 883 ntBASIC17.07■□□□□ 0.32
NKX2-5P52952 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NKX2-5P52952 DUX4L11-201ENST00000611504 1267 ntBASIC17.07■□□□□ 0.32
NKX2-5P52952 AC011551.1-201ENST00000614101 683 ntBASIC17.07■□□□□ 0.32
NKX2-5P52952 DUX4L12-201ENST00000614593 1267 ntBASIC17.07■□□□□ 0.32
NKX2-5P52952 DUX4L14-201ENST00000621227 1267 ntBASIC17.07■□□□□ 0.32
NKX2-5P52952 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.07■□□□□ 0.32
NKX2-5P52952 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.07■□□□□ 0.32
NKX2-5P52952 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms