Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC13.92□□□□□ -0.18
PCP4P48539 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
PCP4P48539 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PCP4P48539 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PCP4P48539 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PCP4P48539 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.92□□□□□ -0.18
PCP4P48539 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.92□□□□□ -0.18
PCP4P48539 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.92□□□□□ -0.18
PCP4P48539 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
PCP4P48539 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PCP4P48539 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.91□□□□□ -0.18
PCP4P48539 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.91□□□□□ -0.18
PCP4P48539 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.91□□□□□ -0.18
PCP4P48539 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC13.91□□□□□ -0.18
PCP4P48539 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PCP4P48539 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PCP4P48539 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PCP4P48539 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PCP4P48539 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PCP4P48539 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.91□□□□□ -0.18
PCP4P48539 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCP4P48539 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC13.9□□□□□ -0.18
PCP4P48539 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCP4P48539 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC13.9□□□□□ -0.18
PCP4P48539 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PCP4P48539 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCP4P48539 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.9□□□□□ -0.18
PCP4P48539 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCP4P48539 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCP4P48539 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PCP4P48539 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
PCP4P48539 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCP4P48539 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCP4P48539 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCP4P48539 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCP4P48539 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCP4P48539 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.9□□□□□ -0.18
PCP4P48539 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCP4P48539 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.9□□□□□ -0.18
PCP4P48539 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCP4P48539 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
PCP4P48539 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCP4P48539 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC13.9□□□□□ -0.18
PCP4P48539 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCP4P48539 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
PCP4P48539 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.89□□□□□ -0.19
PCP4P48539 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4P48539 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.89□□□□□ -0.19
PCP4P48539 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4P48539 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4P48539 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.89□□□□□ -0.19
PCP4P48539 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.89□□□□□ -0.19
PCP4P48539 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4P48539 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4P48539 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4P48539 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4P48539 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PCP4P48539 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4P48539 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4P48539 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PCP4P48539 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PCP4P48539 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4P48539 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4P48539 AP002414.2-202ENST00000590929 1450 ntBASIC13.89□□□□□ -0.19
PCP4P48539 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4P48539 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4P48539 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC13.89□□□□□ -0.19
PCP4P48539 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4P48539 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4P48539 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms