Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RARRES2P6-201ENST00000567333 442 ntBASIC20.97■□□□□ 0.95
SLC1A1P43005 AC231657.2-201ENST00000624556 255 ntBASIC20.97■□□□□ 0.95
SLC1A1P43005 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC1A1P43005 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC1A1P43005 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC1A1P43005 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC1A1P43005 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SLC1A1P43005 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A1P43005 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A1P43005 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SLC1A1P43005 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A1P43005 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A1P43005 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC1A1P43005 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC1A1P43005 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC1A1P43005 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC1A1P43005 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC1A1P43005 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC1A1P43005 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC1A1P43005 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC1A1P43005 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
SLC1A1P43005 CYP2T3P-201ENST00000601990 817 ntBASIC20.96■□□□□ 0.95
SLC1A1P43005 AL031963.3-201ENST00000606441 850 ntBASIC20.96■□□□□ 0.95
SLC1A1P43005 BID-214ENST00000617586 542 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC1A1P43005 AC008694.1-202ENST00000636953 945 ntBASIC20.96■□□□□ 0.95
SLC1A1P43005 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC1A1P43005 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC1A1P43005 AC009237.14-201ENST00000609975 1594 ntBASIC20.96■□□□□ 0.95
SLC1A1P43005 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC1A1P43005 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
SLC1A1P43005 KRT8P20-201ENST00000423953 1409 ntBASIC20.95■□□□□ 0.95
SLC1A1P43005 KRT16P6-202ENST00000425692 1426 ntBASIC20.95■□□□□ 0.95
SLC1A1P43005 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SLC1A1P43005 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC1A1P43005 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC1A1P43005 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC1A1P43005 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC1A1P43005 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC1A1P43005 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC1A1P43005 AL158211.5-201ENST00000623583 2518 ntBASIC20.95■□□□□ 0.94
SLC1A1P43005 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC1A1P43005 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC1A1P43005 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC1A1P43005 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC1A1P43005 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SLC1A1P43005 CYP2T1P-201ENST00000432607 1285 ntBASIC20.95■□□□□ 0.94
SLC1A1P43005 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC1A1P43005 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC1A1P43005 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.95■□□□□ 0.94
SLC1A1P43005 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC1A1P43005 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC1A1P43005 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC1A1P43005 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC1A1P43005 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC1A1P43005 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SLC1A1P43005 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC1A1P43005 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC1A1P43005 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC1A1P43005 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC1A1P43005 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC1A1P43005 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.94■□□□□ 0.94
SLC1A1P43005 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC1A1P43005 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC1A1P43005 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.94■□□□□ 0.94
SLC1A1P43005 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC1A1P43005 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC1A1P43005 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC1A1P43005 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC1A1P43005 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC1A1P43005 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.94■□□□□ 0.94
SLC1A1P43005 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC1A1P43005 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC1A1P43005 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC1A1P43005 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC1A1P43005 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SLC1A1P43005 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC1A1P43005 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC1A1P43005 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
SLC1A1P43005 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC1A1P43005 AC007322.1-201ENST00000426983 750 ntBASIC20.93■□□□□ 0.94
SLC1A1P43005 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC1A1P43005 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC1A1P43005 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC1A1P43005 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC1A1P43005 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC1A1P43005 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SLC1A1P43005 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.93■□□□□ 0.94
SLC1A1P43005 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC1A1P43005 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC1A1P43005 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC1A1P43005 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC1A1P43005 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC1A1P43005 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC1A1P43005 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC1A1P43005 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC1A1P43005 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC1A1P43005 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.92■□□□□ 0.94
SLC1A1P43005 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC1A1P43005 OR10C1-204ENST00000622521 1039 ntBASIC20.92■□□□□ 0.94
SLC1A1P43005 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms