Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.49■□□□□ 0.55
PRKCAP17252 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
PRKCAP17252 CYP2T3P-201ENST00000601990 817 ntBASIC18.49■□□□□ 0.55
PRKCAP17252 AL121832.2-201ENST00000610979 668 ntBASIC18.49■□□□□ 0.55
PRKCAP17252 AL356652.1-201ENST00000615962 565 ntBASIC18.49■□□□□ 0.55
PRKCAP17252 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PRKCAP17252 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
PRKCAP17252 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.49■□□□□ 0.55
PRKCAP17252 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PRKCAP17252 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRKCAP17252 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRKCAP17252 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.48■□□□□ 0.55
PRKCAP17252 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.48■□□□□ 0.55
PRKCAP17252 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
PRKCAP17252 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PRKCAP17252 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRKCAP17252 AL158211.5-201ENST00000623583 2518 ntBASIC18.48■□□□□ 0.55
PRKCAP17252 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRKCAP17252 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRKCAP17252 AL355472.2-201ENST00000422958 438 ntBASIC18.48■□□□□ 0.55
PRKCAP17252 NCF1B-203ENST00000435988 1254 ntBASIC18.48■□□□□ 0.55
PRKCAP17252 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.48■□□□□ 0.55
PRKCAP17252 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRKCAP17252 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.48■□□□□ 0.55
PRKCAP17252 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRKCAP17252 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.48■□□□□ 0.55
PRKCAP17252 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRKCAP17252 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRKCAP17252 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.48■□□□□ 0.55
PRKCAP17252 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.48■□□□□ 0.55
PRKCAP17252 MKRN4P-201ENST00000444706 1521 ntBASIC18.48■□□□□ 0.55
PRKCAP17252 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PRKCAP17252 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.48■□□□□ 0.55
PRKCAP17252 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.48■□□□□ 0.55
PRKCAP17252 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRKCAP17252 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRKCAP17252 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PRKCAP17252 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRKCAP17252 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
PRKCAP17252 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRKCAP17252 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRKCAP17252 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRKCAP17252 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRKCAP17252 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRKCAP17252 KRT18P68-201ENST00000392293 1000 ntBASIC18.47■□□□□ 0.55
PRKCAP17252 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.47■□□□□ 0.55
PRKCAP17252 AC083906.2-201ENST00000511578 360 ntBASIC18.47■□□□□ 0.55
PRKCAP17252 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.47■□□□□ 0.55
PRKCAP17252 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.47■□□□□ 0.55
PRKCAP17252 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PRKCAP17252 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.47■□□□□ 0.55
PRKCAP17252 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.47■□□□□ 0.55
PRKCAP17252 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRKCAP17252 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PRKCAP17252 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRKCAP17252 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRKCAP17252 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRKCAP17252 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.47■□□□□ 0.55
PRKCAP17252 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PRKCAP17252 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.47■□□□□ 0.55
PRKCAP17252 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRKCAP17252 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.47■□□□□ 0.55
PRKCAP17252 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRKCAP17252 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PRKCAP17252 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRKCAP17252 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
PRKCAP17252 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRKCAP17252 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.46■□□□□ 0.55
PRKCAP17252 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PRKCAP17252 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRKCAP17252 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PRKCAP17252 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRKCAP17252 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRKCAP17252 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.46■□□□□ 0.55
PRKCAP17252 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.46■□□□□ 0.55
PRKCAP17252 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.46■□□□□ 0.55
PRKCAP17252 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
PRKCAP17252 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.46■□□□□ 0.55
PRKCAP17252 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.46■□□□□ 0.55
PRKCAP17252 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.46■□□□□ 0.55
PRKCAP17252 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRKCAP17252 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRKCAP17252 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.46■□□□□ 0.55
PRKCAP17252 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PRKCAP17252 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRKCAP17252 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.46■□□□□ 0.55
PRKCAP17252 AC073314.1-201ENST00000568729 2216 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms