Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
MS4A1P11836 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
MS4A1P11836 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
MS4A1P11836 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC25.7■■□□□ 1.71
MS4A1P11836 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
MS4A1P11836 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
MS4A1P11836 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
MS4A1P11836 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
MS4A1P11836 AL512625.2-201ENST00000417533 625 ntBASIC25.7■■□□□ 1.7
MS4A1P11836 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.7■■□□□ 1.7
MS4A1P11836 CYP2T3P-201ENST00000601990 817 ntBASIC25.7■■□□□ 1.7
MS4A1P11836 AC105020.6-201ENST00000621523 1217 ntBASIC25.7■■□□□ 1.7
MS4A1P11836 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.7■■□□□ 1.7
MS4A1P11836 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC25.7■■□□□ 1.7
MS4A1P11836 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
MS4A1P11836 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
MS4A1P11836 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
MS4A1P11836 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
MS4A1P11836 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
MS4A1P11836 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.69■■□□□ 1.7
MS4A1P11836 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.69■■□□□ 1.7
MS4A1P11836 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
MS4A1P11836 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.69■■□□□ 1.7
MS4A1P11836 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
MS4A1P11836 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.69■■□□□ 1.7
MS4A1P11836 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
MS4A1P11836 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.69■■□□□ 1.7
MS4A1P11836 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
MS4A1P11836 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.69■■□□□ 1.7
MS4A1P11836 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
MS4A1P11836 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
MS4A1P11836 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC25.68■■□□□ 1.7
MS4A1P11836 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
MS4A1P11836 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
MS4A1P11836 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
MS4A1P11836 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
MS4A1P11836 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.68■■□□□ 1.7
MS4A1P11836 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
MS4A1P11836 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC25.68■■□□□ 1.7
MS4A1P11836 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.68■■□□□ 1.7
MS4A1P11836 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC25.68■■□□□ 1.7
MS4A1P11836 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
MS4A1P11836 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
MS4A1P11836 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
MS4A1P11836 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
MS4A1P11836 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
MS4A1P11836 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
MS4A1P11836 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC25.67■■□□□ 1.7
MS4A1P11836 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC25.67■■□□□ 1.7
MS4A1P11836 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC25.67■■□□□ 1.7
MS4A1P11836 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.67■■□□□ 1.7
MS4A1P11836 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.67■■□□□ 1.7
MS4A1P11836 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
MS4A1P11836 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
MS4A1P11836 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
MS4A1P11836 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
MS4A1P11836 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.67■■□□□ 1.7
MS4A1P11836 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
MS4A1P11836 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
MS4A1P11836 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.67■■□□□ 1.7
MS4A1P11836 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
MS4A1P11836 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
MS4A1P11836 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
MS4A1P11836 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
MS4A1P11836 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
MS4A1P11836 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
MS4A1P11836 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MS4A1P11836 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.66■■□□□ 1.7
MS4A1P11836 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MS4A1P11836 AC005181.1-201ENST00000604782 1256 ntBASIC25.66■■□□□ 1.7
MS4A1P11836 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
MS4A1P11836 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
MS4A1P11836 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC25.66■■□□□ 1.7
MS4A1P11836 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC25.66■■□□□ 1.7
MS4A1P11836 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MS4A1P11836 H19-201ENST00000411754 1788 ntTSL 5 BASIC25.66■■□□□ 1.7
MS4A1P11836 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC25.66■■□□□ 1.7
MS4A1P11836 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC25.66■■□□□ 1.7
MS4A1P11836 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC25.66■■□□□ 1.7
MS4A1P11836 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
MS4A1P11836 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
MS4A1P11836 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
MS4A1P11836 BX119927.1-201ENST00000636596 1552 ntBASIC25.65■■□□□ 1.7
MS4A1P11836 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
MS4A1P11836 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC25.65■■□□□ 1.7
MS4A1P11836 CD37-204ENST00000535669 1674 ntTSL 2 BASIC25.65■■□□□ 1.7
MS4A1P11836 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
MS4A1P11836 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC25.65■■□□□ 1.7
MS4A1P11836 AC116562.4-201ENST00000641316 2276 ntBASIC25.65■■□□□ 1.7
MS4A1P11836 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
MS4A1P11836 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
MS4A1P11836 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.65■■□□□ 1.7
MS4A1P11836 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.65■■□□□ 1.7
MS4A1P11836 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC25.65■■□□□ 1.7
MS4A1P11836 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.65■■□□□ 1.7
MS4A1P11836 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.65■■□□□ 1.7
MS4A1P11836 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
MS4A1P11836 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
MS4A1P11836 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC25.65■■□□□ 1.7
MS4A1P11836 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms