Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 KRT18P61-201ENST00000585825 1298 ntBASIC17.96■□□□□ 0.47
HLA-DPB1P04440 NTF6G-201ENST00000591094 616 ntBASIC17.96■□□□□ 0.47
HLA-DPB1P04440 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 AC004408.2-201ENST00000623613 2777 ntBASIC17.96■□□□□ 0.46
HLA-DPB1P04440 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
HLA-DPB1P04440 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.96■□□□□ 0.46
HLA-DPB1P04440 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HLA-DPB1P04440 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 TMEM179-206ENST00000616017 1645 ntBASIC17.94■□□□□ 0.46
HLA-DPB1P04440 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 AC061975.6-201ENST00000579045 1553 ntBASIC17.94■□□□□ 0.46
HLA-DPB1P04440 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DPB1P04440 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DPB1P04440 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HLA-DPB1P04440 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPB1P04440 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DPB1P04440 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
HLA-DPB1P04440 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPB1P04440 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DPB1P04440 MIR5787-201ENST00000611784 55 ntBASIC17.93■□□□□ 0.46
HLA-DPB1P04440 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.93■□□□□ 0.46
HLA-DPB1P04440 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DPB1P04440 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HLA-DPB1P04440 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DPB1P04440 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPB1P04440 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPB1P04440 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DPB1P04440 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DPB1P04440 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms