Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.7■■□□□ 1.22
HMGCRP04035 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.7■■□□□ 1.22
HMGCRP04035 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.7■■□□□ 1.22
HMGCRP04035 AC010203.1-204ENST00000548782 407 ntBASIC22.7■■□□□ 1.22
HMGCRP04035 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
HMGCRP04035 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.7■■□□□ 1.22
HMGCRP04035 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
HMGCRP04035 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HMGCRP04035 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
HMGCRP04035 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.7■■□□□ 1.22
HMGCRP04035 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
HMGCRP04035 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HMGCRP04035 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
HMGCRP04035 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HMGCRP04035 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HMGCRP04035 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
HMGCRP04035 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.69■■□□□ 1.22
HMGCRP04035 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HMGCRP04035 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HMGCRP04035 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HMGCRP04035 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.69■■□□□ 1.22
HMGCRP04035 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.69■■□□□ 1.22
HMGCRP04035 LTBR-211ENST00000543190 785 ntTSL 3 BASIC22.69■■□□□ 1.22
HMGCRP04035 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HMGCRP04035 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
HMGCRP04035 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HMGCRP04035 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HMGCRP04035 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
HMGCRP04035 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
HMGCRP04035 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.68■■□□□ 1.22
HMGCRP04035 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.68■■□□□ 1.22
HMGCRP04035 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HMGCRP04035 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
HMGCRP04035 LIN28AP1-201ENST00000429574 405 ntBASIC22.68■■□□□ 1.22
HMGCRP04035 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.68■■□□□ 1.22
HMGCRP04035 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC22.68■■□□□ 1.22
HMGCRP04035 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HMGCRP04035 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
HMGCRP04035 AC006011.2-201ENST00000621313 1158 ntBASIC22.68■■□□□ 1.22
HMGCRP04035 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.68■■□□□ 1.22
HMGCRP04035 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HMGCRP04035 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HMGCRP04035 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
HMGCRP04035 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HMGCRP04035 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HMGCRP04035 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
HMGCRP04035 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCRP04035 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCRP04035 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
HMGCRP04035 AC011484.1-201ENST00000377652 1995 ntBASIC22.67■■□□□ 1.22
HMGCRP04035 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCRP04035 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCRP04035 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
HMGCRP04035 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCRP04035 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCRP04035 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCRP04035 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.67■■□□□ 1.22
HMGCRP04035 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.67■■□□□ 1.22
HMGCRP04035 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCRP04035 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.67■■□□□ 1.22
HMGCRP04035 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.67■■□□□ 1.22
HMGCRP04035 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.67■■□□□ 1.22
HMGCRP04035 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCRP04035 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.67■■□□□ 1.22
HMGCRP04035 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.67■■□□□ 1.22
HMGCRP04035 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCRP04035 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCRP04035 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HMGCRP04035 KRT8P36-201ENST00000489121 1440 ntBASIC22.66■■□□□ 1.22
HMGCRP04035 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
HMGCRP04035 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HMGCRP04035 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.66■■□□□ 1.22
HMGCRP04035 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
HMGCRP04035 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HMGCRP04035 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HMGCRP04035 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HMGCRP04035 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
HMGCRP04035 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.66■■□□□ 1.22
HMGCRP04035 ATP5G1P1-201ENST00000448724 379 ntBASIC22.66■■□□□ 1.22
HMGCRP04035 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC22.66■■□□□ 1.22
HMGCRP04035 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HMGCRP04035 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
HMGCRP04035 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.66■■□□□ 1.22
HMGCRP04035 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
HMGCRP04035 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
HMGCRP04035 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HMGCRP04035 LGALS8-AS1-201ENST00000487567 1457 ntBASIC22.66■■□□□ 1.22
HMGCRP04035 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
HMGCRP04035 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HMGCRP04035 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HMGCRP04035 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC22.65■■□□□ 1.22
HMGCRP04035 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HMGCRP04035 C2orf69P3-201ENST00000565542 1120 ntBASIC22.65■■□□□ 1.22
HMGCRP04035 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HMGCRP04035 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.65■■□□□ 1.22
HMGCRP04035 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
HMGCRP04035 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
HMGCRP04035 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.65■■□□□ 1.22
HMGCRP04035 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
HMGCRP04035 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms