Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPTM1O96005 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CLPTM1O96005 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPTM1O96005 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLPTM1O96005 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLPTM1O96005 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.85■□□□□ 0.61
CLPTM1O96005 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLPTM1O96005 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLPTM1O96005 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLPTM1O96005 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPTM1O96005 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPTM1O96005 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPTM1O96005 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLPTM1O96005 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLPTM1O96005 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.84■□□□□ 0.61
CLPTM1O96005 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLPTM1O96005 AC020916.1-201ENST00000587762 1774 ntBASIC18.84■□□□□ 0.61
CLPTM1O96005 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.84■□□□□ 0.61
CLPTM1O96005 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLPTM1O96005 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLPTM1O96005 ZNRF2P3-201ENST00000424200 374 ntBASIC18.84■□□□□ 0.61
CLPTM1O96005 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.84■□□□□ 0.61
CLPTM1O96005 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.84■□□□□ 0.61
CLPTM1O96005 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.84■□□□□ 0.61
CLPTM1O96005 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLPTM1O96005 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CLPTM1O96005 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CLPTM1O96005 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLPTM1O96005 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.84■□□□□ 0.61
CLPTM1O96005 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.84■□□□□ 0.61
CLPTM1O96005 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.84■□□□□ 0.61
CLPTM1O96005 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLPTM1O96005 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLPTM1O96005 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLPTM1O96005 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.84■□□□□ 0.61
CLPTM1O96005 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLPTM1O96005 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLPTM1O96005 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLPTM1O96005 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CLPTM1O96005 AC090340.1-201ENST00000620778 4980 ntBASIC18.83■□□□□ 0.61
CLPTM1O96005 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLPTM1O96005 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLPTM1O96005 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLPTM1O96005 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLPTM1O96005 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CLPTM1O96005 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CLPTM1O96005 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLPTM1O96005 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.83■□□□□ 0.6
CLPTM1O96005 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLPTM1O96005 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.83■□□□□ 0.6
CLPTM1O96005 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLPTM1O96005 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLPTM1O96005 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLPTM1O96005 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLPTM1O96005 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLPTM1O96005 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLPTM1O96005 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CLPTM1O96005 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CLPTM1O96005 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.83■□□□□ 0.6
CLPTM1O96005 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLPTM1O96005 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPTM1O96005 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPTM1O96005 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CLPTM1O96005 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPTM1O96005 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CLPTM1O96005 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPTM1O96005 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPTM1O96005 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLPTM1O96005 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLPTM1O96005 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.82■□□□□ 0.6
CLPTM1O96005 AL138781.2-201ENST00000617896 1843 ntBASIC18.82■□□□□ 0.6
CLPTM1O96005 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPTM1O96005 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPTM1O96005 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.82■□□□□ 0.6
CLPTM1O96005 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPTM1O96005 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPTM1O96005 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.82■□□□□ 0.6
CLPTM1O96005 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.82■□□□□ 0.6
CLPTM1O96005 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPTM1O96005 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPTM1O96005 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPTM1O96005 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.82■□□□□ 0.6
CLPTM1O96005 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CLPTM1O96005 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLPTM1O96005 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.82■□□□□ 0.6
CLPTM1O96005 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLPTM1O96005 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CLPTM1O96005 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLPTM1O96005 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.81■□□□□ 0.6
CLPTM1O96005 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLPTM1O96005 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.81■□□□□ 0.6
CLPTM1O96005 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CLPTM1O96005 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.81■□□□□ 0.6
CLPTM1O96005 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.81■□□□□ 0.6
CLPTM1O96005 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLPTM1O96005 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLPTM1O96005 Z82202.1-201ENST00000623446 1880 ntBASIC18.81■□□□□ 0.6
CLPTM1O96005 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLPTM1O96005 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLPTM1O96005 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms