Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX6O95475 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX6O95475 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX6O95475 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.74■□□□□ 0.27
SIX6O95475 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX6O95475 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
SIX6O95475 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.74■□□□□ 0.27
SIX6O95475 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIX6O95475 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
SIX6O95475 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SIX6O95475 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX6O95475 PCDHB18P-201ENST00000524813 2368 ntBASIC16.74■□□□□ 0.27
SIX6O95475 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.74■□□□□ 0.27
SIX6O95475 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX6O95475 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX6O95475 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.74■□□□□ 0.27
SIX6O95475 AC106820.2-201ENST00000563775 3264 ntBASIC16.74■□□□□ 0.27
SIX6O95475 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIX6O95475 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX6O95475 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX6O95475 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX6O95475 AL133373.2-201ENST00000623187 2828 ntBASIC16.74■□□□□ 0.27
SIX6O95475 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
SIX6O95475 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX6O95475 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX6O95475 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX6O95475 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.73■□□□□ 0.27
SIX6O95475 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
SIX6O95475 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIX6O95475 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIX6O95475 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.73■□□□□ 0.27
SIX6O95475 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX6O95475 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.73■□□□□ 0.27
SIX6O95475 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX6O95475 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX6O95475 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SIX6O95475 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX6O95475 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SIX6O95475 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.73■□□□□ 0.27
SIX6O95475 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIX6O95475 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX6O95475 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX6O95475 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.72■□□□□ 0.27
SIX6O95475 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX6O95475 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SIX6O95475 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX6O95475 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.72■□□□□ 0.27
SIX6O95475 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIX6O95475 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
SIX6O95475 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SIX6O95475 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.72■□□□□ 0.27
SIX6O95475 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.72■□□□□ 0.27
SIX6O95475 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIX6O95475 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIX6O95475 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.72■□□□□ 0.27
SIX6O95475 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SIX6O95475 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SIX6O95475 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
SIX6O95475 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX6O95475 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX6O95475 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX6O95475 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIX6O95475 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX6O95475 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
SIX6O95475 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.71■□□□□ 0.27
SIX6O95475 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX6O95475 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX6O95475 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SIX6O95475 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX6O95475 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX6O95475 LINC01465-201ENST00000408887 1940 ntBASIC16.71■□□□□ 0.27
SIX6O95475 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SIX6O95475 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX6O95475 TSPY13P-201ENST00000338964 914 ntBASIC16.71■□□□□ 0.27
SIX6O95475 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
SIX6O95475 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SIX6O95475 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX6O95475 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX6O95475 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.71■□□□□ 0.27
SIX6O95475 AC055733.4-201ENST00000638462 1354 ntBASIC16.71■□□□□ 0.27
SIX6O95475 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
SIX6O95475 HCG11-201ENST00000411553 5696 ntBASIC16.71■□□□□ 0.27
SIX6O95475 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX6O95475 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX6O95475 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SIX6O95475 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SIX6O95475 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX6O95475 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX6O95475 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
SIX6O95475 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SIX6O95475 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.7■□□□□ 0.26
SIX6O95475 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SIX6O95475 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIX6O95475 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIX6O95475 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIX6O95475 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIX6O95475 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
SIX6O95475 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
SIX6O95475 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.7■□□□□ 0.26
SIX6O95475 AL032819.2-201ENST00000624543 2162 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms