Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.3■■□□□ 1
LCA5LO95447 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.3■■□□□ 1
LCA5LO95447 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.3■■□□□ 1
LCA5LO95447 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LCA5LO95447 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.29■■□□□ 1
LCA5LO95447 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCA5LO95447 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.29■■□□□ 1
LCA5LO95447 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCA5LO95447 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
LCA5LO95447 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCA5LO95447 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
LCA5LO95447 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
LCA5LO95447 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCA5LO95447 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCA5LO95447 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.29■■□□□ 1
LCA5LO95447 AC016405.3-201ENST00000607710 860 ntBASIC21.29■■□□□ 1
LCA5LO95447 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LCA5LO95447 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.29■■□□□ 1
LCA5LO95447 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCA5LO95447 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.29■■□□□ 1
LCA5LO95447 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.29■■□□□ 1
LCA5LO95447 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LCA5LO95447 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCA5LO95447 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LCA5LO95447 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCA5LO95447 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCA5LO95447 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.28■■□□□ 1
LCA5LO95447 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.28■■□□□ 1
LCA5LO95447 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCA5LO95447 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
LCA5LO95447 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCA5LO95447 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.28■■□□□ 1
LCA5LO95447 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.28■■□□□ 1
LCA5LO95447 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.28■■□□□ 1
LCA5LO95447 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.28■■□□□ 1
LCA5LO95447 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCA5LO95447 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.28■■□□□ 1
LCA5LO95447 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.28■■□□□ 1
LCA5LO95447 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCA5LO95447 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCA5LO95447 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.28■■□□□ 1
LCA5LO95447 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.28■■□□□ 1
LCA5LO95447 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LCA5LO95447 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.28■■□□□ 1
LCA5LO95447 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LCA5LO95447 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.28■■□□□ 1
LCA5LO95447 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
LCA5LO95447 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
LCA5LO95447 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
LCA5LO95447 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
LCA5LO95447 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LCA5LO95447 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
LCA5LO95447 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCA5LO95447 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
LCA5LO95447 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
LCA5LO95447 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.27■■□□□ 1
LCA5LO95447 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.27■■□□□ 1
LCA5LO95447 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.27■■□□□ 1
LCA5LO95447 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
LCA5LO95447 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCA5LO95447 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
LCA5LO95447 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
LCA5LO95447 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LCA5LO95447 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCA5LO95447 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.27■■□□□ 1
LCA5LO95447 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.27■■□□□ 1
LCA5LO95447 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.27■□□□□ 0.99
LCA5LO95447 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
LCA5LO95447 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LCA5LO95447 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCA5LO95447 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCA5LO95447 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCA5LO95447 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCA5LO95447 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.26■□□□□ 0.99
LCA5LO95447 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
LCA5LO95447 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LCA5LO95447 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.26■□□□□ 0.99
LCA5LO95447 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.26■□□□□ 0.99
LCA5LO95447 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.26■□□□□ 0.99
LCA5LO95447 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LCA5LO95447 AL031963.3-201ENST00000606441 850 ntBASIC21.26■□□□□ 0.99
LCA5LO95447 AC100791.3-201ENST00000617619 330 ntBASIC21.26■□□□□ 0.99
LCA5LO95447 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LCA5LO95447 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCA5LO95447 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCA5LO95447 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCA5LO95447 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LCA5LO95447 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.26■□□□□ 0.99
LCA5LO95447 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCA5LO95447 AP001271.2-201ENST00000624018 1556 ntBASIC21.26■□□□□ 0.99
LCA5LO95447 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LCA5LO95447 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCA5LO95447 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.25■□□□□ 0.99
LCA5LO95447 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCA5LO95447 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.25■□□□□ 0.99
LCA5LO95447 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCA5LO95447 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCA5LO95447 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCA5LO95447 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCA5LO95447 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms