Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RIPK2O43353 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RIPK2O43353 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RIPK2O43353 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RIPK2O43353 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RIPK2O43353 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RIPK2O43353 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RIPK2O43353 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RIPK2O43353 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.34■□□□□ 0.85
RIPK2O43353 AC243732.1-201ENST00000612648 864 ntBASIC20.34■□□□□ 0.85
RIPK2O43353 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.34■□□□□ 0.85
RIPK2O43353 MIR6084-201ENST00000622012 110 ntBASIC20.34■□□□□ 0.85
RIPK2O43353 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RIPK2O43353 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RIPK2O43353 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RIPK2O43353 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RIPK2O43353 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RIPK2O43353 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
RIPK2O43353 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RIPK2O43353 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
RIPK2O43353 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.34■□□□□ 0.85
RIPK2O43353 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
RIPK2O43353 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RIPK2O43353 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RIPK2O43353 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.33■□□□□ 0.85
RIPK2O43353 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RIPK2O43353 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RIPK2O43353 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RIPK2O43353 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RIPK2O43353 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RIPK2O43353 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.33■□□□□ 0.85
RIPK2O43353 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.33■□□□□ 0.85
RIPK2O43353 AC104187.1-201ENST00000607510 612 ntBASIC20.33■□□□□ 0.85
RIPK2O43353 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.33■□□□□ 0.84
RIPK2O43353 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.33■□□□□ 0.84
RIPK2O43353 RBM17P2-201ENST00000616397 1405 ntBASIC20.33■□□□□ 0.84
RIPK2O43353 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
RIPK2O43353 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RIPK2O43353 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RIPK2O43353 AC009237.14-201ENST00000609975 1594 ntBASIC20.33■□□□□ 0.84
RIPK2O43353 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RIPK2O43353 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RIPK2O43353 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK2O43353 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.32■□□□□ 0.84
RIPK2O43353 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK2O43353 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK2O43353 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.32■□□□□ 0.84
RIPK2O43353 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK2O43353 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.32■□□□□ 0.84
RIPK2O43353 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK2O43353 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK2O43353 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.32■□□□□ 0.84
RIPK2O43353 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.32■□□□□ 0.84
RIPK2O43353 AP001160.3-201ENST00000601484 763 ntBASIC20.32■□□□□ 0.84
RIPK2O43353 AL031432.3-201ENST00000607698 485 ntBASIC20.32■□□□□ 0.84
RIPK2O43353 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK2O43353 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK2O43353 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RIPK2O43353 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK2O43353 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK2O43353 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
RIPK2O43353 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RIPK2O43353 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK2O43353 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK2O43353 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RIPK2O43353 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.32■□□□□ 0.84
RIPK2O43353 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK2O43353 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.31■□□□□ 0.84
RIPK2O43353 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK2O43353 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK2O43353 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK2O43353 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK2O43353 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK2O43353 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK2O43353 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK2O43353 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.31■□□□□ 0.84
RIPK2O43353 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RIPK2O43353 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.31■□□□□ 0.84
RIPK2O43353 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK2O43353 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
RIPK2O43353 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.31■□□□□ 0.84
RIPK2O43353 CCDC92B-201ENST00000575506 885 ntBASIC20.31■□□□□ 0.84
RIPK2O43353 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.31■□□□□ 0.84
RIPK2O43353 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.31■□□□□ 0.84
RIPK2O43353 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK2O43353 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
RIPK2O43353 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.31■□□□□ 0.84
RIPK2O43353 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK2O43353 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK2O43353 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK2O43353 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK2O43353 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK2O43353 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK2O43353 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK2O43353 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RIPK2O43353 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK2O43353 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RIPK2O43353 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK2O43353 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.3■□□□□ 0.84
RIPK2O43353 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms