Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.48■□□□□ 0.71
HDAC3O15379 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC3O15379 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
HDAC3O15379 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC3O15379 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC3O15379 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC3O15379 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
HDAC3O15379 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC3O15379 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC3O15379 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.47■□□□□ 0.71
HDAC3O15379 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC3O15379 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HDAC3O15379 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC3O15379 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC3O15379 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HDAC3O15379 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC3O15379 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC3O15379 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HDAC3O15379 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.47■□□□□ 0.71
HDAC3O15379 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HDAC3O15379 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC3O15379 CDV3P1-201ENST00000471403 739 ntBASIC19.47■□□□□ 0.71
HDAC3O15379 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC3O15379 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.47■□□□□ 0.71
HDAC3O15379 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HDAC3O15379 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.47■□□□□ 0.71
HDAC3O15379 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC3O15379 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC3O15379 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC3O15379 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC3O15379 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.47■□□□□ 0.71
HDAC3O15379 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HDAC3O15379 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.46■□□□□ 0.71
HDAC3O15379 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.46■□□□□ 0.71
HDAC3O15379 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.46■□□□□ 0.71
HDAC3O15379 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HDAC3O15379 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 PGM5P4-201ENST00000421970 445 ntBASIC19.46■□□□□ 0.71
HDAC3O15379 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.46■□□□□ 0.71
HDAC3O15379 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.46■□□□□ 0.71
HDAC3O15379 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.46■□□□□ 0.71
HDAC3O15379 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC3O15379 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.45■□□□□ 0.7
HDAC3O15379 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC3O15379 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HDAC3O15379 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HDAC3O15379 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC3O15379 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC3O15379 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC3O15379 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC3O15379 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.45■□□□□ 0.7
HDAC3O15379 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC3O15379 AC009237.14-201ENST00000609975 1594 ntBASIC19.45■□□□□ 0.7
HDAC3O15379 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HDAC3O15379 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.45■□□□□ 0.7
HDAC3O15379 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC3O15379 AC097381.1-201ENST00000429019 1296 ntBASIC19.45■□□□□ 0.7
HDAC3O15379 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.45■□□□□ 0.7
HDAC3O15379 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.45■□□□□ 0.7
HDAC3O15379 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC3O15379 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HDAC3O15379 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC3O15379 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HDAC3O15379 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HDAC3O15379 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.45■□□□□ 0.7
HDAC3O15379 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC3O15379 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.45■□□□□ 0.7
HDAC3O15379 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.45■□□□□ 0.7
HDAC3O15379 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.45■□□□□ 0.7
HDAC3O15379 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC3O15379 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HDAC3O15379 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC3O15379 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.45■□□□□ 0.7
HDAC3O15379 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDAC3O15379 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.44■□□□□ 0.7
HDAC3O15379 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDAC3O15379 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HDAC3O15379 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDAC3O15379 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDAC3O15379 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HDAC3O15379 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.44■□□□□ 0.7
HDAC3O15379 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HDAC3O15379 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms