Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MBD3L3A6NE82 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.68■□□□□ 0.42
MBD3L3A6NE82 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.68■□□□□ 0.42
MBD3L3A6NE82 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.68■□□□□ 0.42
MBD3L3A6NE82 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.68■□□□□ 0.42
MBD3L3A6NE82 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.68■□□□□ 0.42
MBD3L3A6NE82 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD3L3A6NE82 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD3L3A6NE82 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD3L3A6NE82 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MBD3L3A6NE82 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MBD3L3A6NE82 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
MBD3L3A6NE82 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD3L3A6NE82 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.68■□□□□ 0.42
MBD3L3A6NE82 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD3L3A6NE82 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD3L3A6NE82 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
MBD3L3A6NE82 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD3L3A6NE82 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD3L3A6NE82 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD3L3A6NE82 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MBD3L3A6NE82 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
MBD3L3A6NE82 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
MBD3L3A6NE82 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.67■□□□□ 0.42
MBD3L3A6NE82 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
MBD3L3A6NE82 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.67■□□□□ 0.42
MBD3L3A6NE82 AF186192.3-201ENST00000583427 947 ntBASIC17.67■□□□□ 0.42
MBD3L3A6NE82 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.67■□□□□ 0.42
MBD3L3A6NE82 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD3L3A6NE82 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MBD3L3A6NE82 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.67■□□□□ 0.42
MBD3L3A6NE82 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.67■□□□□ 0.42
MBD3L3A6NE82 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD3L3A6NE82 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.65■□□□□ 0.42
MBD3L3A6NE82 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
MBD3L3A6NE82 KRT16P6-202ENST00000425692 1426 ntBASIC17.64■□□□□ 0.42
MBD3L3A6NE82 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
MBD3L3A6NE82 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
MBD3L3A6NE82 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MBD3L3A6NE82 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MBD3L3A6NE82 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MBD3L3A6NE82 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.64■□□□□ 0.41
MBD3L3A6NE82 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
MBD3L3A6NE82 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.64■□□□□ 0.41
MBD3L3A6NE82 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.64■□□□□ 0.41
MBD3L3A6NE82 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.64■□□□□ 0.41
MBD3L3A6NE82 BX088651.1-201ENST00000540551 451 ntBASIC17.64■□□□□ 0.41
MBD3L3A6NE82 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
MBD3L3A6NE82 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MBD3L3A6NE82 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MBD3L3A6NE82 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MBD3L3A6NE82 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
MBD3L3A6NE82 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.64■□□□□ 0.41
MBD3L3A6NE82 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MBD3L3A6NE82 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MBD3L3A6NE82 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L3A6NE82 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.63■□□□□ 0.41
MBD3L3A6NE82 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L3A6NE82 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms