Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 CANT1-210ENST00000591732 578 ntTSL 416.81■□□□□ 0.288e-10■■□□□ 11.7
PRPF8Q6P2Q9 CANT1-213ENST00000592033 502 ntTSL 216.81■□□□□ 0.288e-10■■□□□ 11.7
PRPF8Q6P2Q9 POLR2L-202ENST00000534030 585 ntTSL 416.43■□□□□ 0.228e-10■■□□□ 11.7
PRPF8Q6P2Q9 CANT1-212ENST00000591811 466 ntTSL 216■□□□□ 0.158e-10■■□□□ 11.7
PRPF8Q6P2Q9 CANT1-205ENST00000588075 881 ntTSL 215.06■□□□□ 08e-10■■□□□ 11.7
PRPF8Q6P2Q9 FANCA-222ENST00000567205 413 ntTSL 1 (best)14.08□□□□□ -0.168e-10■■□□□ 11.7
PRPF8Q6P2Q9 RECQL5-211ENST00000580078 816 ntTSL 213.13□□□□□ -0.318e-10■■□□□ 11.7
PRPF8Q6P2Q9 CANT1-209ENST00000591625 599 ntTSL 412.7□□□□□ -0.388e-10■■□□□ 11.7
PRPF8Q6P2Q9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.438e-10■■□□□ 11.7
PRPF8Q6P2Q9 CANT1-214ENST00000592228 1546 ntTSL 512.26□□□□□ -0.458e-10■■□□□ 11.7
PRPF8Q6P2Q9 XRCC3-207ENST00000554774 510 ntTSL 212.2□□□□□ -0.468e-10■■□□□ 11.7
PRPF8Q6P2Q9 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.498e-10■■□□□ 11.7
PRPF8Q6P2Q9 PKD1-231ENST00000566784 493 ntTSL 511.94□□□□□ -0.58e-10■■□□□ 11.7
PRPF8Q6P2Q9 IL4R-208ENST00000563002 541 ntTSL 511.38□□□□□ -0.593e-6■■□□□ 11.7
PRPF8Q6P2Q9 CANT1-208ENST00000590370 614 ntTSL 211.31□□□□□ -0.68e-10■■□□□ 11.7
PRPF8Q6P2Q9 CANT1-201ENST00000302345 3534 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.688e-10■■□□□ 11.7
PRPF8Q6P2Q9 ZNF821-204ENST00000561700 527 ntTSL 510.72□□□□□ -0.698e-10■■□□□ 11.7
PRPF8Q6P2Q9 CANT1-207ENST00000588611 900 ntTSL 39.79□□□□□ -0.848e-10■■□□□ 11.7
PRPF8Q6P2Q9 DNAJC11-207ENST00000465911 745 ntTSL 29.53□□□□□ -0.888e-10■■□□□ 11.7
PRPF8Q6P2Q9 RBMS1-207ENST00000464200 386 ntTSL 29.13□□□□□ -0.958e-10■■□□□ 11.7
PRPF8Q6P2Q9 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.973e-6■■□□□ 11.7
PRPF8Q6P2Q9 RNF111-202ENST00000557998 4803 ntTSL 2 BASIC8.78□□□□□ -13e-6■■□□□ 11.7
PRPF8Q6P2Q9 CANT1-202ENST00000392446 3252 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.038e-10■■□□□ 11.7
PRPF8Q6P2Q9 CFAP97-202ENST00000458385 4852 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.128e-10■■□□□ 11.7
PRPF8Q6P2Q9 VAPA-203ENST00000577539 3760 nt4.22□□□□□ -1.738e-10■■□□□ 11.7
PRPF8Q6P2Q9 RBMS1-212ENST00000477965 2289 ntTSL 24.21□□□□□ -1.738e-10■■□□□ 11.7
PRPF8Q6P2Q9 XPO1-210ENST00000449444 579 ntTSL 43.22□□□□□ -1.898e-10■■□□□ 11.7
PRPF8Q6P2Q9 DLG1-226ENST00000485409 656 ntTSL 33.22□□□□□ -1.898e-10■■□□□ 11.7
PRPF8Q6P2Q9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.18□□□□□ -1.93e-6■■□□□ 11.7
PRPF8Q6P2Q9 RBMS1-208ENST00000474147 2854 ntTSL 22.91□□□□□ -1.948e-10■■□□□ 11.7
PRPF8Q6P2Q9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.73□□□□□ -0.211e-6■■□□□ 11.7
PRPF8Q6P2Q9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.46□□□□□ -0.251e-6■■□□□ 11.7
PRPF8Q6P2Q9 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.14□□□□□ -0.471e-6■■□□□ 11.7
PRPF8Q6P2Q9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.521e-6■■□□□ 11.7
PRPF8Q6P2Q9 CDIP1-203ENST00000562579 577 ntTSL 511.64□□□□□ -0.551e-6■■□□□ 11.7
PRPF8Q6P2Q9 EP400-202ENST00000332482 2588 ntTSL 1 (best)14.82□□□□□ -0.044e-12■■□□□ 11.7
PRPF8Q6P2Q9 CCNH-208ENST00000510921 549 ntTSL 40.59□□□□□ -2.318e-8■■□□□ 11.7
PRPF8Q6P2Q9 CCNH-209ENST00000511207 451 ntTSL 2-0.19□□□□□ -2.448e-8■■□□□ 11.7
PRPF8Q6P2Q9 RBM39-234ENST00000487604 370 ntTSL 3-1.79□□□□□ -2.72e-17■■□□□ 11.7
PRPF8Q6P2Q9 NFKB2-202ENST00000336486 851 ntTSL 317.79■□□□□ 0.442e-7■■□□□ 11.7
PRPF8Q6P2Q9 FGFR4-213ENST00000511076 838 ntTSL 516.24■□□□□ 0.195e-12■■□□□ 11.7
PRPF8Q6P2Q9 AFDN-218ENST00000507704 1031 ntTSL 311.4□□□□□ -0.594e-9■■□□□ 11.7
PRPF8Q6P2Q9 TRIM24-205ENST00000493595 811 ntTSL 33.87□□□□□ -1.797e-8■■□□□ 11.7
PRPF8Q6P2Q9 ERBB3-207ENST00000549061 560 ntTSL 412.83□□□□□ -0.368e-7■■□□□ 11.7
PRPF8Q6P2Q9 SUPT5H-212ENST00000598520 514 ntTSL 214.72□□□□□ -0.057e-11■■□□□ 11.7
PRPF8Q6P2Q9 DOCK6-210ENST00000588666 444 ntTSL 510.47□□□□□ -0.732e-6■■□□□ 11.7
PRPF8Q6P2Q9 VPS51-213ENST00000533827 1078 ntTSL 314.94□□□□□ -0.022e-6■■□□□ 11.7
PRPF8Q6P2Q9 VPS51-203ENST00000526856 691 ntTSL 214.12□□□□□ -0.152e-6■■□□□ 11.7
PRPF8Q6P2Q9 VPS51-216ENST00000534591 1503 ntTSL 513.57□□□□□ -0.242e-6■■□□□ 11.7
PRPF8Q6P2Q9 VRK3-214ENST00000598553 595 ntTSL 29.19□□□□□ -0.945e-6■■□□□ 11.7
PRPF8Q6P2Q9 CLK1-213ENST00000492793 596 ntTSL 4-0.33□□□□□ -2.464e-7■■□□□ 11.7
PRPF8Q6P2Q9 UPF1-202ENST00000594243 683 ntTSL 312.43□□□□□ -0.424e-9■■□□□ 11.7
PRPF8Q6P2Q9 HEXDC-214ENST00000583978 742 ntTSL 219.02■□□□□ 0.641e-8■■□□□ 11.7
PRPF8Q6P2Q9 HEXDC-209ENST00000581482 553 ntTSL 510.87□□□□□ -0.671e-8■■□□□ 11.7
PRPF8Q6P2Q9 SMARCC1-205ENST00000483847 804 ntTSL 29.81□□□□□ -0.842e-6■■□□□ 11.7
PRPF8Q6P2Q9 GSN-202ENST00000373807 2823 ntTSL 211.65□□□□□ -0.552e-6■■□□□ 11.7
PRPF8Q6P2Q9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.733e-6■■□□□ 11.7
PRPF8Q6P2Q9 RNPS1-208ENST00000563857 739 ntTSL 213.58□□□□□ -0.231e-14■■□□□ 11.7
PRPF8Q6P2Q9 RNPS1-214ENST00000565333 479 ntTSL 410.22□□□□□ -0.771e-14■■□□□ 11.7
PRPF8Q6P2Q9 RNPS1-225ENST00000569709 574 ntTSL 49.45□□□□□ -0.91e-14■■□□□ 11.7
PRPF8Q6P2Q9 MNX1-206ENST00000479817 169 ntTSL 1 (best)7.55□□□□□ -1.23e-6■■□□□ 11.7
PRPF8Q6P2Q9 SELENOP-206ENST00000509276 738 ntTSL 58.4□□□□□ -1.075e-9■■□□□ 11.7
PRPF8Q6P2Q9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.418e-8■■□□□ 11.7
PRPF8Q6P2Q9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.368e-8■■□□□ 11.7
PRPF8Q6P2Q9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.128e-8■■□□□ 11.7
PRPF8Q6P2Q9 CD151-220ENST00000532045 1803 ntTSL 515.51■□□□□ 0.078e-8■■□□□ 11.7
PRPF8Q6P2Q9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 08e-8■■□□□ 11.7
PRPF8Q6P2Q9 CD151-218ENST00000530726 1407 ntTSL 511.31□□□□□ -0.68e-8■■□□□ 11.7
PRPF8Q6P2Q9 NXN-209ENST00000575455 914 ntTSL 1 (best)11.98□□□□□ -0.493e-8■■□□□ 11.7
PRPF8Q6P2Q9 TNKS-205ENST00000518027 766 ntTSL 35.63□□□□□ -1.515e-11■■□□□ 11.7
PRPF8Q6P2Q9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.134e-7■■□□□ 11.7
PRPF8Q6P2Q9 CTSD-204ENST00000433655 2006 ntTSL 512.94□□□□□ -0.344e-7■■□□□ 11.7
PRPF8Q6P2Q9 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.354e-7■■□□□ 11.7
PRPF8Q6P2Q9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.364e-7■■□□□ 11.7
PRPF8Q6P2Q9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.434e-7■■□□□ 11.7
PRPF8Q6P2Q9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.444e-7■■□□□ 11.7
PRPF8Q6P2Q9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.544e-7■■□□□ 11.7
PRPF8Q6P2Q9 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.664e-7■■□□□ 11.7
PRPF8Q6P2Q9 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC10.25□□□□□ -0.774e-7■■□□□ 11.7
PRPF8Q6P2Q9 NCOA2-203ENST00000518363 1834 ntTSL 25.79□□□□□ -1.483e-6■■□□□ 11.7
PRPF8Q6P2Q9 ALDH18A1-205ENST00000489386 543 ntTSL 35.09□□□□□ -1.591e-6■■□□□ 11.7
PRPF8Q6P2Q9 C9orf3-210ENST00000462125 961 ntTSL 311.24□□□□□ -0.612e-7■■□□□ 11.7
PRPF8Q6P2Q9 CARD10-207ENST00000476871 583 ntTSL 417.22■□□□□ 0.357e-8■■□□□ 11.7
PRPF8Q6P2Q9 SLC4A2-206ENST00000466368 548 ntTSL 413.22□□□□□ -0.295e-6■■□□□ 11.7
PRPF8Q6P2Q9 PDXDC1-212ENST00000565986 561 ntTSL 210.88□□□□□ -0.672e-7■■□□□ 11.7
PRPF8Q6P2Q9 PSME2-211ENST00000559613 300 ntTSL 33.25□□□□□ -1.891e-10■■□□□ 11.7
PRPF8Q6P2Q9 PTPRVP-203ENST00000638692 1189 ntTSL 1 (best)14.7□□□□□ -0.065e-8■■□□□ 11.7
PRPF8Q6P2Q9 PTPRVP-204ENST00000639439 821 ntTSL 1 (best)13.38□□□□□ -0.275e-8■■□□□ 11.7
PRPF8Q6P2Q9 EIF2AK1-202ENST00000422786 782 ntTSL 310.38□□□□□ -0.755e-6■■□□□ 11.7
PRPF8Q6P2Q9 SLC22A23-207ENST00000467177 1221 ntTSL 1 (best)12.48□□□□□ -0.414e-10■■□□□ 11.7
PRPF8Q6P2Q9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.01□□□□□ -0.494e-10■■□□□ 11.7
PRPF8Q6P2Q9 SLC22A23-212ENST00000497691 2555 ntTSL 1 (best)11.47□□□□□ -0.574e-10■■□□□ 11.7
PRPF8Q6P2Q9 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC9.2□□□□□ -0.944e-10■■□□□ 11.7
PRPF8Q6P2Q9 MS4A3-204ENST00000525686 746 ntTSL 39.96□□□□□ -0.823e-6■■□□□ 11.7
PRPF8Q6P2Q9 MS4A3-206ENST00000528298 486 ntTSL 39.96□□□□□ -0.823e-6■■□□□ 11.7
PRPF8Q6P2Q9 MS4A3-202ENST00000358152 1516 ntTSL 5 BASIC8.84□□□□□ -0.993e-6■■□□□ 11.7
PRPF8Q6P2Q9 MORF4L1-222ENST00000560710 908 ntTSL 27.29□□□□□ -1.248e-7■■□□□ 11.7
PRPF8Q6P2Q9 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC6.21□□□□□ -1.423e-6■■□□□ 11.7
PRPF8Q6P2Q9 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.423e-6■■□□□ 11.7
PRPF8Q6P2Q9 HIP1R-203ENST00000535012 924 ntTSL 310.47□□□□□ -0.732e-7■■□□□ 11.7
Retrieved 100 of 73,762 protein–RNA pairs in 1129.9 ms