RNA–Protein interactions for RNA: ENST00000559209.5

RNF111-206, Transcript of ring finger protein 111, humanhuman

TSL 1 (best) BASIC

Gene RNF111, Length 5,278 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-206ENST00000559209 NISCHQ9Y2I1 1504 aa7.8□□□□□ -1.16
RNF111-206ENST00000559209 CHIC1Q5VXU3 224 aa7.6□□□□□ -1.19
RNF111-206ENST00000559209 EHMT2Q96KQ7 1210 aa7.43□□□□□ -1.22
RNF111-206ENST00000559209 DCAF8L2P0C7V8 631 aa7.09□□□□□ -1.27
RNF111-206ENST00000559209 CCDC180Q9P1Z9 1646 aa7.04□□□□□ -1.28
RNF111-206ENST00000559209 AEBP2Q6ZN18 517 aaPredicted RBP6.95□□□□□ -1.3
RNF111-206ENST00000559209 SLC24A1O60721 1099 aa6.85□□□□□ -1.31
RNF111-206ENST00000559209 ABCC9O60706 1549 aa6.83□□□□□ -1.32
RNF111-206ENST00000559209 PLPPR3Q6T4P5 718 aa6.81□□□□□ -1.32
RNF111-206ENST00000559209 RB1CC1Q8TDY2 1594 aa6.75□□□□□ -1.33
RNF111-206ENST00000559209 RANGAP1P46060 587 aaPredicted RBP6.7□□□□□ -1.34
RNF111-206ENST00000559209 NACADO15069 1562 aa6.69□□□□□ -1.34
RNF111-206ENST00000559209 SLC4A1APQ9BWU0 796 aaKnown RBP6.61□□□□□ -1.35
RNF111-206ENST00000559209 MYT1LQ9UL68 1186 aa6.58□□□□□ -1.36
RNF111-206ENST00000559209 MYO15BQ96JP2 1530 aa6.58□□□□□ -1.36
RNF111-206ENST00000559209 SHROOM4Q9ULL8 1493 aa6.55□□□□□ -1.36
RNF111-206ENST00000559209 DCAF1Q9Y4B6 1507 aa6.52□□□□□ -1.37
RNF111-206ENST00000559209 NCBP3Q53F19 620 aaKnown RBP6.51□□□□□ -1.37
RNF111-206ENST00000559209 SENP3Q9H4L4 574 aaPredicted RBP6.5□□□□□ -1.37
RNF111-206ENST00000559209 HAP1P54257 671 aaPredicted RBP6.48□□□□□ -1.37
RNF111-206ENST00000559209 ZCCHC6Q5VYS8 1495 aaKnown RBP6.48□□□□□ -1.37
RNF111-206ENST00000559209 AMER1Q5JTC6 1135 aaPredicted RBP6.48□□□□□ -1.37
RNF111-206ENST00000559209 PHF23Q9BUL5 403 aaPredicted RBP6.43□□□□□ -1.38
RNF111-206ENST00000559209 ATP1B4Q9UN42 357 aaPredicted RBP6.42□□□□□ -1.38
RNF111-206ENST00000559209 PABPN1Q86U42 306 aaKnown RBP eCLIP6.4□□□□□ -1.39
RNF111-206ENST00000559209 KCNA4P22459 653 aa6.39□□□□□ -1.39
RNF111-206ENST00000559209 SCRIBQ14160 1630 aa6.36□□□□□ -1.39
RNF111-206ENST00000559209 NBR1Q14596 966 aa6.24□□□□□ -1.41
RNF111-206ENST00000559209 FAM9AQ8IZU1 332 aaPredicted RBP6.24□□□□□ -1.41
RNF111-206ENST00000559209 SMARCA2P51531 1590 aa6.23□□□□□ -1.41
RNF111-206ENST00000559209 CECR2Q9BXF3 1484 aa6.23□□□□□ -1.41
RNF111-206ENST00000559209 RTN4Q9NQC3 1192 aaKnown RBP6.23□□□□□ -1.41
RNF111-206ENST00000559209 DCAF8L1A6NGE4 600 aa6.23□□□□□ -1.41
RNF111-206ENST00000559209 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.22□□□□□ -1.41
RNF111-206ENST00000559209 KLHL34Q8N239 644 aa6.22□□□□□ -1.41
RNF111-206ENST00000559209 FKBP8Q14318 412 aa6.21□□□□□ -1.41
RNF111-206ENST00000559209 MYT1Q01538 1121 aa6.2□□□□□ -1.42
RNF111-206ENST00000559209 ERCC6Q03468 1493 aa6.19□□□□□ -1.42
RNF111-206ENST00000559209 BAZ1AQ9NRL2 1556 aaPredicted RBP6.18□□□□□ -1.42
RNF111-206ENST00000559209 BCANQ96GW7 911 aa6.18□□□□□ -1.42
RNF111-206ENST00000559209 BAZ1BQ9UIG0 1483 aaKnown RBP6.16□□□□□ -1.42
RNF111-206ENST00000559209 CFAP44Q96MT7 982 aa6.16□□□□□ -1.42
RNF111-206ENST00000559209 EIF4G1Q04637 1599 aaKnown RBP6.16□□□□□ -1.42
RNF111-206ENST00000559209 CC2D2AQ9P2K1 1620 aa6.13□□□□□ -1.43
RNF111-206ENST00000559209 C14orf37Q86TY3 774 aa6.13□□□□□ -1.43
RNF111-206ENST00000559209 ADRA2BP18089 450 aa6.12□□□□□ -1.43
RNF111-206ENST00000559209 SCAF1Q9H7N4 1312 aaKnown RBP6.12□□□□□ -1.43
RNF111-206ENST00000559209 PDS5BQ9NTI5 1447 aa6.12□□□□□ -1.43
RNF111-206ENST00000559209 BICRAQ9NZM4 1560 aa6.1□□□□□ -1.43
RNF111-206ENST00000559209 TPRNQ4KMQ1 711 aa6.1□□□□□ -1.43
RNF111-206ENST00000559209 UNC13AQ9UPW8 1703 aa6.08□□□□□ -1.44
RNF111-206ENST00000559209 TULP1O00294 542 aaPredicted RBP6.08□□□□□ -1.44
RNF111-206ENST00000559209 HMGXB3Q12766 1538 aa6.08□□□□□ -1.44
RNF111-206ENST00000559209 PIAS4Q8N2W9 510 aaPredicted RBP6.08□□□□□ -1.44
RNF111-206ENST00000559209 NCAPD3P42695 1498 aa6.07□□□□□ -1.44
RNF111-206ENST00000559209 SMARCA4P51532 1647 aa6.06□□□□□ -1.44
RNF111-206ENST00000559209 CSRNP3Q8WYN3 585 aa6.05□□□□□ -1.44
RNF111-206ENST00000559209 PLEKHG5O94827 1062 aa6.04□□□□□ -1.44
RNF111-206ENST00000559209 ERICH6Q7L0X2 663 aa6.04□□□□□ -1.44
RNF111-206ENST00000559209 PPP4R3CPQ6ZMV5 832 aa6.04□□□□□ -1.44
RNF111-206ENST00000559209 CUX2O14529 1486 aa6.04□□□□□ -1.44
RNF111-206ENST00000559209 ATAD2BQ9ULI0 1458 aa6.03□□□□□ -1.44
RNF111-206ENST00000559209 PELP1Q8IZL8 1130 aaKnown RBP6.02□□□□□ -1.45
RNF111-206ENST00000559209 ABCC8Q09428 1581 aa6.01□□□□□ -1.45
RNF111-206ENST00000559209 ARID3AQ99856 593 aa6.01□□□□□ -1.45
RNF111-206ENST00000559209 POLR3GLQ9BT43 218 aa6.01□□□□□ -1.45
RNF111-206ENST00000559209 LAMC3Q9Y6N6 1575 aa5.99□□□□□ -1.45
RNF111-206ENST00000559209 SUPT5HO00267 1087 aaKnown RBP5.99□□□□□ -1.45
RNF111-206ENST00000559209 CEP164Q9UPV0 1460 aa5.98□□□□□ -1.45
RNF111-206ENST00000559209 TOP2AP11388 1531 aaKnown RBP5.98□□□□□ -1.45
RNF111-206ENST00000559209 HOMEZQ8IX15 550 aa5.97□□□□□ -1.45
RNF111-206ENST00000559209 CADPSQ9ULU8 1353 aa5.97□□□□□ -1.45
RNF111-206ENST00000559209 MRC2Q9UBG0 1479 aa5.96□□□□□ -1.45
RNF111-206ENST00000559209 PRKCSHP14314 528 aaPredicted RBP5.95□□□□□ -1.46
RNF111-206ENST00000559209 PEG3Q9GZU2 1588 aa5.94□□□□□ -1.46
RNF111-206ENST00000559209 PAXIP1Q6ZW49 1069 aaPredicted RBP5.94□□□□□ -1.46
RNF111-206ENST00000559209 DNAJC5BQ9UF47 199 aa5.93□□□□□ -1.46
RNF111-206ENST00000559209 TTBK1Q5TCY1 1321 aaPredicted RBP5.92□□□□□ -1.46
RNF111-206ENST00000559209 RSF1Q96T23 1441 aaPredicted RBP5.9□□□□□ -1.46
RNF111-206ENST00000559209 MROH2BQ7Z745 1585 aa5.9□□□□□ -1.47
RNF111-206ENST00000559209 FOXD4L1Q9NU39 408 aa5.9□□□□□ -1.47
RNF111-206ENST00000559209 CCER1Q8TC90 406 aaPredicted RBP5.89□□□□□ -1.47
RNF111-206ENST00000559209 FBXO3Q9UK99 471 aa5.89□□□□□ -1.47
RNF111-206ENST00000559209 FANCD2Q9BXW9 1451 aa5.89□□□□□ -1.47
RNF111-206ENST00000559209 PLCD3Q8N3E9 789 aa5.89□□□□□ -1.47
RNF111-206ENST00000559209 CIZ1Q9ULV3 898 aaPredicted RBP5.89□□□□□ -1.47
RNF111-206ENST00000559209 IFT140Q96RY7 1462 aa5.88□□□□□ -1.47
RNF111-206ENST00000559209 PODXL2Q9NZ53 605 aa5.88□□□□□ -1.47
RNF111-206ENST00000559209 NPM1P06748 294 aaKnown RBP eCLIP5.86□□□□□ -1.47
RNF111-206ENST00000559209 FBLN2P98095 1184 aa5.85□□□□□ -1.47
RNF111-206ENST00000559209 CHMP7Q8WUX9 453 aaPredicted RBP5.85□□□□□ -1.47
RNF111-206ENST00000559209 OSCARQ8IYS5 282 aa5.84□□□□□ -1.47
RNF111-206ENST00000559209 WDR70Q9NW82 654 aa5.84□□□□□ -1.47
RNF111-206ENST00000559209 CFTRP13569 1480 aa5.83□□□□□ -1.48
RNF111-206ENST00000559209 DAXXQ9UER7 740 aaPredicted RBP5.83□□□□□ -1.48
RNF111-206ENST00000559209 WDR97A6NE52 1622 aa5.82□□□□□ -1.48
RNF111-206ENST00000559209 WIZO95785 1651 aa5.82□□□□□ -1.48
RNF111-206ENST00000559209 WRNQ14191 1432 aaPredicted RBP eCLIP5.81□□□□□ -1.48
RNF111-206ENST00000559209 CCDC88BA6NC98 1476 aa5.81□□□□□ -1.48
RNF111-206ENST00000559209 TAOK2Q9UL54 1235 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms