Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CDK11AQ9UQ88 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC31.16■■■□□ 2.58
CDK11AQ9UQ88 KRT8P9-201ENST00000558927 1449 ntBASIC31.16■■■□□ 2.58
CDK11AQ9UQ88 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC31.16■■■□□ 2.58
CDK11AQ9UQ88 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
CDK11AQ9UQ88 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC31.16■■■□□ 2.58
CDK11AQ9UQ88 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC31.16■■■□□ 2.58
CDK11AQ9UQ88 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC31.16■■■□□ 2.58
CDK11AQ9UQ88 P4HB-223ENST00000576390 439 ntTSL 4 BASIC31.16■■■□□ 2.58
CDK11AQ9UQ88 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC31.16■■■□□ 2.58
CDK11AQ9UQ88 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
CDK11AQ9UQ88 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC31.16■■■□□ 2.58
CDK11AQ9UQ88 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC31.15■■■□□ 2.58
CDK11AQ9UQ88 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC31.15■■■□□ 2.58
CDK11AQ9UQ88 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDK11AQ9UQ88 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDK11AQ9UQ88 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDK11AQ9UQ88 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDK11AQ9UQ88 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC31.15■■■□□ 2.58
CDK11AQ9UQ88 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC31.15■■■□□ 2.58
CDK11AQ9UQ88 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC31.15■■■□□ 2.58
CDK11AQ9UQ88 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CDK11AQ9UQ88 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDK11AQ9UQ88 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
CDK11AQ9UQ88 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC31.15■■■□□ 2.58
CDK11AQ9UQ88 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDK11AQ9UQ88 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CDK11AQ9UQ88 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CDK11AQ9UQ88 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC31.14■■■□□ 2.58
CDK11AQ9UQ88 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CDK11AQ9UQ88 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CDK11AQ9UQ88 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CDK11AQ9UQ88 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC31.14■■■□□ 2.58
CDK11AQ9UQ88 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC31.14■■■□□ 2.58
CDK11AQ9UQ88 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC31.14■■■□□ 2.58
CDK11AQ9UQ88 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CDK11AQ9UQ88 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
CDK11AQ9UQ88 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC31.14■■■□□ 2.58
CDK11AQ9UQ88 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC31.14■■■□□ 2.57
CDK11AQ9UQ88 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC31.13■■■□□ 2.57
CDK11AQ9UQ88 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
CDK11AQ9UQ88 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CDK11AQ9UQ88 MIR1238-201ENST00000408483 83 ntBASIC31.13■■■□□ 2.57
CDK11AQ9UQ88 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC31.13■■■□□ 2.57
CDK11AQ9UQ88 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC31.13■■■□□ 2.57
CDK11AQ9UQ88 FITM1-202ENST00000559294 800 ntBASIC31.13■■■□□ 2.57
CDK11AQ9UQ88 AC012676.1-201ENST00000574705 1949 ntBASIC31.13■■■□□ 2.57
CDK11AQ9UQ88 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CDK11AQ9UQ88 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CDK11AQ9UQ88 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CDK11AQ9UQ88 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC31.13■■■□□ 2.57
CDK11AQ9UQ88 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
CDK11AQ9UQ88 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 KRT18P35-201ENST00000510488 1269 ntBASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 CR392000.1-201ENST00000624770 1228 ntBASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 KRT16P1-201ENST00000399124 1418 ntBASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CDK11AQ9UQ88 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC31.11■■■□□ 2.57
CDK11AQ9UQ88 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CDK11AQ9UQ88 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC31.11■■■□□ 2.57
CDK11AQ9UQ88 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC31.11■■■□□ 2.57
CDK11AQ9UQ88 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CDK11AQ9UQ88 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CDK11AQ9UQ88 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC31.11■■■□□ 2.57
CDK11AQ9UQ88 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC31.11■■■□□ 2.57
CDK11AQ9UQ88 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC31.11■■■□□ 2.57
CDK11AQ9UQ88 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC31.11■■■□□ 2.57
CDK11AQ9UQ88 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
CDK11AQ9UQ88 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CDK11AQ9UQ88 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CDK11AQ9UQ88 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
CDK11AQ9UQ88 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC31.1■■■□□ 2.57
CDK11AQ9UQ88 LINC01568-207ENST00000641790 1380 ntBASIC31.1■■■□□ 2.57
CDK11AQ9UQ88 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CDK11AQ9UQ88 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC31.1■■■□□ 2.57
CDK11AQ9UQ88 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC31.1■■■□□ 2.57
CDK11AQ9UQ88 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC31.1■■■□□ 2.57
CDK11AQ9UQ88 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CDK11AQ9UQ88 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CDK11AQ9UQ88 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC31.1■■■□□ 2.57
CDK11AQ9UQ88 AL590326.2-201ENST00000625139 305 ntBASIC31.1■■■□□ 2.57
CDK11AQ9UQ88 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CDK11AQ9UQ88 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC31.1■■■□□ 2.57
CDK11AQ9UQ88 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC31.1■■■□□ 2.57
CDK11AQ9UQ88 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC31.09■■■□□ 2.57
CDK11AQ9UQ88 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CDK11AQ9UQ88 CALM3-202ENST00000391918 702 ntTSL 2 BASIC31.09■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms