Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE1Q9NRR8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC10.36□□□□□ -0.75
CDC42SE1Q9NRR8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 AC009113.1-201ENST00000570267 2443 ntBASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 AL353803.4-201ENST00000565882 1934 ntBASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 AC099778.1-201ENST00000568593 1911 ntBASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CDC42SE1Q9NRR8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms