Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALX4Q9H161 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALX4Q9H161 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALX4Q9H161 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALX4Q9H161 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.91■□□□□ 0.3
ALX4Q9H161 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALX4Q9H161 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALX4Q9H161 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ALX4Q9H161 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALX4Q9H161 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALX4Q9H161 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALX4Q9H161 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ALX4Q9H161 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALX4Q9H161 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.9■□□□□ 0.3
ALX4Q9H161 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
ALX4Q9H161 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ALX4Q9H161 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALX4Q9H161 AC009237.3-201ENST00000393279 1427 ntBASIC16.9■□□□□ 0.3
ALX4Q9H161 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALX4Q9H161 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALX4Q9H161 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.9■□□□□ 0.3
ALX4Q9H161 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ALX4Q9H161 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.9■□□□□ 0.3
ALX4Q9H161 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALX4Q9H161 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALX4Q9H161 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ALX4Q9H161 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
ALX4Q9H161 SMUG1P1-201ENST00000590640 811 ntBASIC16.9■□□□□ 0.3
ALX4Q9H161 MIR2861-201ENST00000636310 90 ntBASIC16.9■□□□□ 0.3
ALX4Q9H161 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
ALX4Q9H161 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
ALX4Q9H161 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALX4Q9H161 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.9■□□□□ 0.3
ALX4Q9H161 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALX4Q9H161 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ALX4Q9H161 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.9■□□□□ 0.3
ALX4Q9H161 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ALX4Q9H161 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.9■□□□□ 0.3
ALX4Q9H161 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALX4Q9H161 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.89■□□□□ 0.29
ALX4Q9H161 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALX4Q9H161 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ALX4Q9H161 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALX4Q9H161 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALX4Q9H161 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.89■□□□□ 0.29
ALX4Q9H161 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.89■□□□□ 0.29
ALX4Q9H161 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.89■□□□□ 0.29
ALX4Q9H161 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.89■□□□□ 0.29
ALX4Q9H161 MIR6084-201ENST00000622012 110 ntBASIC16.89■□□□□ 0.29
ALX4Q9H161 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALX4Q9H161 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ALX4Q9H161 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALX4Q9H161 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALX4Q9H161 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALX4Q9H161 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.89■□□□□ 0.29
ALX4Q9H161 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.89■□□□□ 0.29
ALX4Q9H161 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALX4Q9H161 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALX4Q9H161 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALX4Q9H161 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.88■□□□□ 0.29
ALX4Q9H161 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALX4Q9H161 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALX4Q9H161 AP004607.4-201ENST00000530158 1459 ntBASIC16.88■□□□□ 0.29
ALX4Q9H161 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.88■□□□□ 0.29
ALX4Q9H161 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ALX4Q9H161 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.88■□□□□ 0.29
ALX4Q9H161 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.88■□□□□ 0.29
ALX4Q9H161 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.88■□□□□ 0.29
ALX4Q9H161 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.88■□□□□ 0.29
ALX4Q9H161 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALX4Q9H161 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.88■□□□□ 0.29
ALX4Q9H161 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALX4Q9H161 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ALX4Q9H161 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALX4Q9H161 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALX4Q9H161 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALX4Q9H161 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALX4Q9H161 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ALX4Q9H161 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.88■□□□□ 0.29
ALX4Q9H161 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.88■□□□□ 0.29
ALX4Q9H161 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALX4Q9H161 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALX4Q9H161 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ALX4Q9H161 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.88■□□□□ 0.29
ALX4Q9H161 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ALX4Q9H161 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALX4Q9H161 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALX4Q9H161 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
ALX4Q9H161 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ALX4Q9H161 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.87■□□□□ 0.29
ALX4Q9H161 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.87■□□□□ 0.29
ALX4Q9H161 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALX4Q9H161 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALX4Q9H161 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
ALX4Q9H161 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.87■□□□□ 0.29
ALX4Q9H161 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALX4Q9H161 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.87■□□□□ 0.29
ALX4Q9H161 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALX4Q9H161 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALX4Q9H161 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms