Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK3BQ9BT76 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK3BQ9BT76 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UPK3BQ9BT76 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK3BQ9BT76 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC13.93□□□□□ -0.18
UPK3BQ9BT76 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK3BQ9BT76 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 ESRRAP1-201ENST00000400596 1257 ntBASIC13.92□□□□□ -0.18
UPK3BQ9BT76 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 AC026366.1-201ENST00000488803 879 ntBASIC13.92□□□□□ -0.18
UPK3BQ9BT76 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 AP003097.1-201ENST00000530657 1135 ntBASIC13.92□□□□□ -0.18
UPK3BQ9BT76 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 PNMA6B-201ENST00000538162 1200 ntBASIC13.92□□□□□ -0.18
UPK3BQ9BT76 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 AC121338.2-201ENST00000622535 1744 ntBASIC13.92□□□□□ -0.18
UPK3BQ9BT76 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK3BQ9BT76 AC092368.3-202ENST00000574180 1591 ntBASIC13.92□□□□□ -0.18
UPK3BQ9BT76 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.91□□□□□ -0.18
UPK3BQ9BT76 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms