Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.74■□□□□ 0.91
PRICKLE1Q96MT3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRICKLE1Q96MT3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 AC023632.3-201ENST00000521633 145 ntBASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.72■□□□□ 0.91
PRICKLE1Q96MT3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 AC069544.1-201ENST00000609399 999 ntBASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRICKLE1Q96MT3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
PRICKLE1Q96MT3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 POM121L13P-201ENST00000422362 380 ntBASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PRICKLE1Q96MT3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms