Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.27■□□□□ 0.83
LRRC39Q96DD0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC39Q96DD0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRC39Q96DD0 AC009237.14-201ENST00000609975 1594 ntBASIC20.26■□□□□ 0.83
LRRC39Q96DD0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC39Q96DD0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC39Q96DD0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC39Q96DD0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LRRC39Q96DD0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC39Q96DD0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.26■□□□□ 0.83
LRRC39Q96DD0 AC034268.1-201ENST00000441047 882 ntBASIC20.26■□□□□ 0.83
LRRC39Q96DD0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC39Q96DD0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC39Q96DD0 PTBP1P-201ENST00000554374 1601 ntBASIC20.26■□□□□ 0.83
LRRC39Q96DD0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC39Q96DD0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC39Q96DD0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC39Q96DD0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC39Q96DD0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC39Q96DD0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC39Q96DD0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 TREX1-205ENST00000625293 1783 ntBASIC20.25■□□□□ 0.83
LRRC39Q96DD0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC39Q96DD0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 BX323043.1-201ENST00000641006 1765 ntBASIC20.24■□□□□ 0.83
LRRC39Q96DD0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 AC016405.3-201ENST00000607710 860 ntBASIC20.24■□□□□ 0.83
LRRC39Q96DD0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC39Q96DD0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.23■□□□□ 0.83
LRRC39Q96DD0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 MCRIP2P1-201ENST00000394346 511 ntBASIC20.23■□□□□ 0.83
LRRC39Q96DD0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 KRT8P17-201ENST00000453110 1448 ntBASIC20.23■□□□□ 0.83
LRRC39Q96DD0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC39Q96DD0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms