Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CFAP43Q8NDM7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CFAP43Q8NDM7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CFAP43Q8NDM7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CFAP43Q8NDM7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
CFAP43Q8NDM7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CFAP43Q8NDM7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CFAP43Q8NDM7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CFAP43Q8NDM7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
CFAP43Q8NDM7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC31.63■■■□□ 2.65
CFAP43Q8NDM7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC31.62■■■□□ 2.65
CFAP43Q8NDM7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CFAP43Q8NDM7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CFAP43Q8NDM7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC31.62■■■□□ 2.65
CFAP43Q8NDM7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC31.62■■■□□ 2.65
CFAP43Q8NDM7 NTF6B-201ENST00000591913 560 ntBASIC31.62■■■□□ 2.65
CFAP43Q8NDM7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC31.62■■■□□ 2.65
CFAP43Q8NDM7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
CFAP43Q8NDM7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC31.62■■■□□ 2.65
CFAP43Q8NDM7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC31.62■■■□□ 2.65
CFAP43Q8NDM7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
CFAP43Q8NDM7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
CFAP43Q8NDM7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CFAP43Q8NDM7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CFAP43Q8NDM7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC31.61■■■□□ 2.65
CFAP43Q8NDM7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC31.61■■■□□ 2.65
CFAP43Q8NDM7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC31.61■■■□□ 2.65
CFAP43Q8NDM7 AL121829.2-201ENST00000620908 328 ntBASIC31.61■■■□□ 2.65
CFAP43Q8NDM7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CFAP43Q8NDM7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
CFAP43Q8NDM7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC31.61■■■□□ 2.65
CFAP43Q8NDM7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CFAP43Q8NDM7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CFAP43Q8NDM7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CFAP43Q8NDM7 AL390719.1-204ENST00000412397 1219 ntBASIC31.6■■■□□ 2.65
CFAP43Q8NDM7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC31.6■■■□□ 2.65
CFAP43Q8NDM7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
CFAP43Q8NDM7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC31.6■■■□□ 2.65
CFAP43Q8NDM7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CFAP43Q8NDM7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CFAP43Q8NDM7 AL390955.1-201ENST00000428694 934 ntBASIC31.6■■■□□ 2.65
CFAP43Q8NDM7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC31.6■■■□□ 2.65
CFAP43Q8NDM7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC31.6■■■□□ 2.65
CFAP43Q8NDM7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CFAP43Q8NDM7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
CFAP43Q8NDM7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CFAP43Q8NDM7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC31.59■■■□□ 2.65
CFAP43Q8NDM7 LINC01568-207ENST00000641790 1380 ntBASIC31.59■■■□□ 2.65
CFAP43Q8NDM7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC31.59■■■□□ 2.65
CFAP43Q8NDM7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CFAP43Q8NDM7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CFAP43Q8NDM7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC31.59■■■□□ 2.65
CFAP43Q8NDM7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC31.59■■■□□ 2.65
CFAP43Q8NDM7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CFAP43Q8NDM7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CFAP43Q8NDM7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC31.59■■■□□ 2.65
CFAP43Q8NDM7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
CFAP43Q8NDM7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC31.58■■■□□ 2.65
CFAP43Q8NDM7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CFAP43Q8NDM7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CFAP43Q8NDM7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CFAP43Q8NDM7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC31.58■■■□□ 2.65
CFAP43Q8NDM7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CFAP43Q8NDM7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC31.58■■■□□ 2.65
CFAP43Q8NDM7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC31.58■■■□□ 2.65
CFAP43Q8NDM7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CFAP43Q8NDM7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC31.57■■■□□ 2.65
CFAP43Q8NDM7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC31.57■■■□□ 2.65
CFAP43Q8NDM7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC31.57■■■□□ 2.65
CFAP43Q8NDM7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC31.57■■■□□ 2.65
CFAP43Q8NDM7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC31.57■■■□□ 2.65
CFAP43Q8NDM7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.65
CFAP43Q8NDM7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
CFAP43Q8NDM7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CFAP43Q8NDM7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC31.57■■■□□ 2.64
CFAP43Q8NDM7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
CFAP43Q8NDM7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC31.57■■■□□ 2.64
CFAP43Q8NDM7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CFAP43Q8NDM7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC31.57■■■□□ 2.64
CFAP43Q8NDM7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
CFAP43Q8NDM7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
CFAP43Q8NDM7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
CFAP43Q8NDM7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CFAP43Q8NDM7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CFAP43Q8NDM7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC31.57■■■□□ 2.64
CFAP43Q8NDM7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
CFAP43Q8NDM7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CFAP43Q8NDM7 AF106564.1-201ENST00000607058 2553 ntBASIC31.56■■■□□ 2.64
CFAP43Q8NDM7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CFAP43Q8NDM7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CFAP43Q8NDM7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC31.56■■■□□ 2.64
CFAP43Q8NDM7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC31.56■■■□□ 2.64
CFAP43Q8NDM7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC31.56■■■□□ 2.64
CFAP43Q8NDM7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CFAP43Q8NDM7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC31.55■■■□□ 2.64
CFAP43Q8NDM7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CFAP43Q8NDM7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC31.55■■■□□ 2.64
CFAP43Q8NDM7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC31.55■■■□□ 2.64
CFAP43Q8NDM7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CFAP43Q8NDM7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms