Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIX5Q8N196 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIX5Q8N196 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIX5Q8N196 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SIX5Q8N196 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.58■□□□□ 0.89
SIX5Q8N196 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIX5Q8N196 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SIX5Q8N196 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.58■□□□□ 0.89
SIX5Q8N196 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SIX5Q8N196 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIX5Q8N196 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SIX5Q8N196 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.58■□□□□ 0.89
SIX5Q8N196 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SIX5Q8N196 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SIX5Q8N196 AC023632.3-201ENST00000521633 145 ntBASIC20.58■□□□□ 0.89
SIX5Q8N196 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.58■□□□□ 0.89
SIX5Q8N196 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SIX5Q8N196 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SIX5Q8N196 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.58■□□□□ 0.88
SIX5Q8N196 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIX5Q8N196 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIX5Q8N196 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SIX5Q8N196 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.57■□□□□ 0.88
SIX5Q8N196 AC127496.7-201ENST00000625110 1798 ntBASIC20.57■□□□□ 0.88
SIX5Q8N196 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIX5Q8N196 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
SIX5Q8N196 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIX5Q8N196 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIX5Q8N196 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIX5Q8N196 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SIX5Q8N196 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIX5Q8N196 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.57■□□□□ 0.88
SIX5Q8N196 AC116562.2-201ENST00000507042 360 ntBASIC20.57■□□□□ 0.88
SIX5Q8N196 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.57■□□□□ 0.88
SIX5Q8N196 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SIX5Q8N196 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.57■□□□□ 0.88
SIX5Q8N196 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIX5Q8N196 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIX5Q8N196 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.57■□□□□ 0.88
SIX5Q8N196 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIX5Q8N196 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIX5Q8N196 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIX5Q8N196 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIX5Q8N196 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SIX5Q8N196 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIX5Q8N196 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.56■□□□□ 0.88
SIX5Q8N196 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.56■□□□□ 0.88
SIX5Q8N196 LIN28AP1-201ENST00000429574 405 ntBASIC20.56■□□□□ 0.88
SIX5Q8N196 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.56■□□□□ 0.88
SIX5Q8N196 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.56■□□□□ 0.88
SIX5Q8N196 AC010203.1-204ENST00000548782 407 ntBASIC20.56■□□□□ 0.88
SIX5Q8N196 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.56■□□□□ 0.88
SIX5Q8N196 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.56■□□□□ 0.88
SIX5Q8N196 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.56■□□□□ 0.88
SIX5Q8N196 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIX5Q8N196 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SIX5Q8N196 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.55■□□□□ 0.88
SIX5Q8N196 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIX5Q8N196 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SIX5Q8N196 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIX5Q8N196 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIX5Q8N196 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.55■□□□□ 0.88
SIX5Q8N196 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIX5Q8N196 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIX5Q8N196 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.55■□□□□ 0.88
SIX5Q8N196 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SIX5Q8N196 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.55■□□□□ 0.88
SIX5Q8N196 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.55■□□□□ 0.88
SIX5Q8N196 ATP5G1P1-201ENST00000448724 379 ntBASIC20.55■□□□□ 0.88
SIX5Q8N196 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
SIX5Q8N196 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.55■□□□□ 0.88
SIX5Q8N196 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SIX5Q8N196 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SIX5Q8N196 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.55■□□□□ 0.88
SIX5Q8N196 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIX5Q8N196 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIX5Q8N196 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SIX5Q8N196 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIX5Q8N196 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SIX5Q8N196 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SIX5Q8N196 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.54■□□□□ 0.88
SIX5Q8N196 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIX5Q8N196 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIX5Q8N196 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
SIX5Q8N196 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.54■□□□□ 0.88
SIX5Q8N196 KSR1P1-201ENST00000446298 240 ntBASIC20.54■□□□□ 0.88
SIX5Q8N196 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SIX5Q8N196 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.54■□□□□ 0.88
SIX5Q8N196 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SIX5Q8N196 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.54■□□□□ 0.88
SIX5Q8N196 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIX5Q8N196 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIX5Q8N196 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
SIX5Q8N196 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIX5Q8N196 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SIX5Q8N196 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SIX5Q8N196 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
SIX5Q8N196 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SIX5Q8N196 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIX5Q8N196 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms