Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH15P55291 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH15P55291 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH15P55291 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH15P55291 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH15P55291 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH15P55291 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CDH15P55291 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH15P55291 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH15P55291 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDH15P55291 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.66■□□□□ 0.58
CDH15P55291 OR2I1P-207ENST00000453522 948 ntBASIC18.66■□□□□ 0.58
CDH15P55291 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
CDH15P55291 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
CDH15P55291 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH15P55291 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH15P55291 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH15P55291 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH15P55291 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH15P55291 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH15P55291 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH15P55291 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH15P55291 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH15P55291 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH15P55291 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDH15P55291 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH15P55291 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH15P55291 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH15P55291 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH15P55291 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH15P55291 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH15P55291 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CDH15P55291 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CDH15P55291 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH15P55291 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CDH15P55291 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CDH15P55291 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH15P55291 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDH15P55291 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.64■□□□□ 0.58
CDH15P55291 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CDH15P55291 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH15P55291 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDH15P55291 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH15P55291 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH15P55291 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH15P55291 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH15P55291 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CDH15P55291 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH15P55291 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH15P55291 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH15P55291 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH15P55291 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH15P55291 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH15P55291 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CDH15P55291 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH15P55291 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH15P55291 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
CDH15P55291 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH15P55291 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDH15P55291 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH15P55291 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH15P55291 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH15P55291 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH15P55291 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH15P55291 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH15P55291 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDH15P55291 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH15P55291 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH15P55291 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDH15P55291 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH15P55291 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH15P55291 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH15P55291 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH15P55291 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH15P55291 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH15P55291 AC020763.4-201ENST00000623414 4170 ntBASIC18.63■□□□□ 0.57
CDH15P55291 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH15P55291 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.62■□□□□ 0.57
CDH15P55291 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CDH15P55291 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH15P55291 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH15P55291 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH15P55291 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH15P55291 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH15P55291 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CDH15P55291 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH15P55291 AL162430.1-201ENST00000480705 870 ntBASIC18.62■□□□□ 0.57
CDH15P55291 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.62■□□□□ 0.57
CDH15P55291 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDH15P55291 BX005040.4-201ENST00000637145 1518 ntBASIC18.62■□□□□ 0.57
CDH15P55291 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDH15P55291 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH15P55291 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CDH15P55291 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH15P55291 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH15P55291 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH15P55291 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH15P55291 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDH15P55291 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH15P55291 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms