Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 PBY1YBR094W 2262 nt2.08□□□□□ -2.08
TY4A-JP47023 LHS1YKL073W 2646 nt2.08□□□□□ -2.08
TY4A-JP47023 NOC3YLR002C 1992 nt2.08□□□□□ -2.08
TY4A-JP47023 UTP22YGR090W 3714 nt2.07□□□□□ -2.08
TY4A-JP47023 FKS1YLR342W 5631 nt2.07□□□□□ -2.08
TY4A-JP47023 UTP21YLR409C 2820 nt2.07□□□□□ -2.08
TY4A-JP47023 snR74snR74 88 nt2.07□□□□□ -2.08
TY4A-JP47023 BRE1YDL074C 2103 nt2.07□□□□□ -2.08
TY4A-JP47023 YDR182W-AYDR182W-A 204 nt2.07□□□□□ -2.08
TY4A-JP47023 ECM12YHR021W-A 456 nt2.07□□□□□ -2.08
TY4A-JP47023 YHR210CYHR210C 1026 nt2.07□□□□□ -2.08
TY4A-JP47023 YIR030W-AYIR030W-A 384 nt2.07□□□□□ -2.08
TY4A-JP47023 YLR342W-AYLR342W-A 174 nt2.07□□□□□ -2.08
TY4A-JP47023 SBE22YHR103W 2559 nt2.07□□□□□ -2.08
TY4A-JP47023 SFB2YNL049C 2631 nt2.07□□□□□ -2.08
TY4A-JP47023 UBR2YLR024C 5619 nt2.06□□□□□ -2.08
TY4A-JP47023 NUP170YBL079W 4509 nt2.06□□□□□ -2.08
TY4A-JP47023 SPO21YOL091W 1830 nt2.06□□□□□ -2.08
TY4A-JP47023 DGR1YNL130C-A 147 nt2.06□□□□□ -2.08
TY4A-JP47023 YBR174CYBR174C 315 nt2.06□□□□□ -2.08
TY4A-JP47023 PIP2YOR363C 2991 nt2.06□□□□□ -2.08
TY4A-JP47023 YLR035C-AYLR035C-A 3468 nt2.05□□□□□ -2.08
TY4A-JP47023 YMR247W-AYMR247W-A 144 nt2.05□□□□□ -2.08
TY4A-JP47023 PKH2YOL100W 3246 nt2.05□□□□□ -2.08
TY4A-JP47023 LRE1YCL051W 1752 nt2.05□□□□□ -2.08
TY4A-JP47023 SLI15YBR156C 2097 nt2.05□□□□□ -2.08
TY4A-JP47023 SPO75YLL005C 2607 nt2.04□□□□□ -2.08
TY4A-JP47023 UBP2YOR124C 3819 nt2.04□□□□□ -2.08
TY4A-JP47023 YJL120WYJL120W 324 nt2.03□□□□□ -2.08
TY4A-JP47023 YMR175W-AYMR175W-A 195 nt2.03□□□□□ -2.08
TY4A-JP47023 AIM44YPL158C 2277 nt2.02□□□□□ -2.09
TY4A-JP47023 RPL31AYDL075W 342 nt2.02□□□□□ -2.09
TY4A-JP47023 YOR019WYOR019W 2193 nt2.02□□□□□ -2.09
TY4A-JP47023 YLR140WYLR140W 327 nt2.01□□□□□ -2.09
TY4A-JP47023 YNL338WYNL338W 159 nt2.01□□□□□ -2.09
TY4A-JP47023 COG4YPR105C 2586 nt2□□□□□ -2.09
TY4A-JP47023 COF1YLL050C 432 nt2□□□□□ -2.09
TY4A-JP47023 SPO24YPR036W-A 204 nt2□□□□□ -2.09
TY4A-JP47023 NCA2YPR155C 1851 nt2□□□□□ -2.09
TY4A-JP47023 BPH1YCR032W 6504 nt2□□□□□ -2.09
TY4A-JP47023 HIR3YJR140C 4947 nt2□□□□□ -2.09
TY4A-JP47023 KCS1YDR017C 3153 nt2□□□□□ -2.09
TY4A-JP47023 ALK1YGL021W 2283 nt2□□□□□ -2.09
TY4A-JP47023 YGL217CYGL217C 342 nt1.99□□□□□ -2.09
TY4A-JP47023 REV3YPL167C 4515 nt1.99□□□□□ -2.09
TY4A-JP47023 IRC20YLR247C 4671 nt1.99□□□□□ -2.09
TY4A-JP47023 YHR214C-BYHR214C-B 5382 nt1.99□□□□□ -2.09
TY4A-JP47023 SLD3YGL113W 2007 nt1.98□□□□□ -2.09
TY4A-JP47023 UFD4YKL010C 4452 nt1.97□□□□□ -2.09
TY4A-JP47023 SKI3YPR189W 4299 nt1.97□□□□□ -2.09
TY4A-JP47023 YJL150WYJL150W 303 nt1.97□□□□□ -2.09
TY4A-JP47023 YBL008W-AYBL008W-A 240 nt1.97□□□□□ -2.09
TY4A-JP47023 YBR131C-AYBR131C-A 90 nt1.97□□□□□ -2.09
TY4A-JP47023 snR52snR52 92 nt1.97□□□□□ -2.09
TY4A-JP47023 ATG11YPR049C 3537 nt1.97□□□□□ -2.09
TY4A-JP47023 YLL019W-AYLL019W-A 93 nt1.96□□□□□ -2.1
TY4A-JP47023 PEP1YBL017C 4740 nt1.96□□□□□ -2.1
TY4A-JP47023 TRS65YGR166W 1683 nt1.96□□□□□ -2.1
TY4A-JP47023 YLR419WYLR419W 4308 nt1.95□□□□□ -2.1
TY4A-JP47023 CTF4YPR135W 2784 nt1.95□□□□□ -2.1
TY4A-JP47023 RAD50YNL250W 3939 nt1.95□□□□□ -2.1
TY4A-JP47023 PRP39YML046W 1890 nt1.94□□□□□ -2.1
TY4A-JP47023 FIG4YNL325C 2640 nt1.94□□□□□ -2.1
TY4A-JP47023 SMC1YFL008W 3678 nt1.93□□□□□ -2.1
TY4A-JP47023 AHC1YOR023C 1701 nt1.93□□□□□ -2.1
TY4A-JP47023 GYP5YPL249C 2685 nt1.93□□□□□ -2.1
TY4A-JP47023 YLL054CYLL054C 2532 nt1.92□□□□□ -2.1
TY4A-JP47023 YDL196WYDL196W 330 nt1.92□□□□□ -2.1
TY4A-JP47023 KIP1YBL063W 3336 nt1.92□□□□□ -2.1
TY4A-JP47023 YDR521WYDR521W 336 nt1.91□□□□□ -2.1
TY4A-JP47023 EMC5YIL027C 426 nt1.91□□□□□ -2.1
TY4A-JP47023 YOR345CYOR345C 351 nt1.9□□□□□ -2.11
TY4A-JP47023 IFH1YLR223C 3258 nt1.9□□□□□ -2.11
TY4A-JP47023 MYO2YOR326W 4725 nt1.89□□□□□ -2.11
TY4A-JP47023 YEL073CYEL073C 324 nt1.89□□□□□ -2.11
TY4A-JP47023 YNL097C-BYNL097C-B 123 nt1.89□□□□□ -2.11
TY4A-JP47023 snR46snR46 197 nt1.89□□□□□ -2.11
TY4A-JP47023 BST1YFL025C 3090 nt1.88□□□□□ -2.11
TY4A-JP47023 MMS4YBR098W 2076 nt1.87□□□□□ -2.11
TY4A-JP47023 SXM1YDR395W 2835 nt1.87□□□□□ -2.11
TY4A-JP47023 UFD2YDL190C 2886 nt1.87□□□□□ -2.11
TY4A-JP47023 YDL206WYDL206W 2289 nt1.86□□□□□ -2.11
TY4A-JP47023 Q0092Q0092 141 nt1.86□□□□□ -2.11
TY4A-JP47023 VPS15YBR097W 4365 nt1.84□□□□□ -2.11
TY4A-JP47023 YBR206WYBR206W 324 nt1.84□□□□□ -2.11
TY4A-JP47023 MON2YNL297C 4911 nt1.83□□□□□ -2.12
TY4A-JP47023 SPC110YDR356W 2835 nt1.83□□□□□ -2.12
TY4A-JP47023 YER172C-AYER172C-A 381 nt1.83□□□□□ -2.12
TY4A-JP47023 YMR272W-BYMR272W-B 108 nt1.83□□□□□ -2.12
TY4A-JP47023 RPL33BYOR234C 324 nt1.83□□□□□ -2.12
TY4A-JP47023 SMC4YLR086W 4257 nt1.83□□□□□ -2.12
TY4A-JP47023 SLX4YLR135W 2247 nt1.83□□□□□ -2.12
TY4A-JP47023 NUT1YGL151W 3399 nt1.82□□□□□ -2.12
TY4A-JP47023 APL1YJR005W 2103 nt1.82□□□□□ -2.12
TY4A-JP47023 YGR109W-BYGR109W-B 4644 nt1.81□□□□□ -2.12
TY4A-JP47023 YOR381W-AYOR381W-A 168 nt1.81□□□□□ -2.12
TY4A-JP47023 CHS1YNL192W 3396 nt1.81□□□□□ -2.12
TY4A-JP47023 TRM3YDL112W 4311 nt1.8□□□□□ -2.12
TY4A-JP47023 RTP1YMR185W 2946 nt1.79□□□□□ -2.12
TY4A-JP47023 KAP122YGL016W 3246 nt1.79□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms