Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.18■□□□□ 0.82
CCNFP41002 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCNFP41002 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCNFP41002 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCNFP41002 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CCNFP41002 IKBKGP1-201ENST00000612193 1073 ntBASIC20.18■□□□□ 0.82
CCNFP41002 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNFP41002 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNFP41002 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNFP41002 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCNFP41002 KRT8P36-201ENST00000489121 1440 ntBASIC20.18■□□□□ 0.82
CCNFP41002 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCNFP41002 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNFP41002 AC018445.3-201ENST00000624177 1945 ntBASIC20.17■□□□□ 0.82
CCNFP41002 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNFP41002 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.17■□□□□ 0.82
CCNFP41002 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.17■□□□□ 0.82
CCNFP41002 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
CCNFP41002 AC091799.1-201ENST00000422823 811 ntBASIC20.17■□□□□ 0.82
CCNFP41002 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.17■□□□□ 0.82
CCNFP41002 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNFP41002 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CCNFP41002 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNFP41002 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNFP41002 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNFP41002 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
CCNFP41002 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNFP41002 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNFP41002 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
CCNFP41002 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCNFP41002 TMEM179-206ENST00000616017 1645 ntBASIC20.16■□□□□ 0.82
CCNFP41002 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCNFP41002 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNFP41002 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCNFP41002 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNFP41002 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNFP41002 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNFP41002 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.16■□□□□ 0.82
CCNFP41002 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.16■□□□□ 0.82
CCNFP41002 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCNFP41002 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.16■□□□□ 0.82
CCNFP41002 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.16■□□□□ 0.82
CCNFP41002 DUX4L16-201ENST00000555130 1264 ntBASIC20.16■□□□□ 0.82
CCNFP41002 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.16■□□□□ 0.82
CCNFP41002 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.16■□□□□ 0.82
CCNFP41002 AC231657.2-201ENST00000624556 255 ntBASIC20.16■□□□□ 0.82
CCNFP41002 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNFP41002 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.16■□□□□ 0.82
CCNFP41002 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCNFP41002 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.16■□□□□ 0.82
CCNFP41002 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCNFP41002 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNFP41002 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.15■□□□□ 0.82
CCNFP41002 AC087289.5-201ENST00000586076 3175 ntBASIC20.15■□□□□ 0.82
CCNFP41002 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNFP41002 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.15■□□□□ 0.82
CCNFP41002 CDV3P1-201ENST00000471403 739 ntBASIC20.15■□□□□ 0.82
CCNFP41002 AL162412.1-201ENST00000567129 965 ntBASIC20.15■□□□□ 0.82
CCNFP41002 AL591742.1-201ENST00000604433 565 ntBASIC20.15■□□□□ 0.82
CCNFP41002 BX119927.1-201ENST00000636596 1552 ntBASIC20.15■□□□□ 0.82
CCNFP41002 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNFP41002 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNFP41002 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.15■□□□□ 0.82
CCNFP41002 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCNFP41002 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCNFP41002 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CCNFP41002 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
CCNFP41002 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCNFP41002 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.14■□□□□ 0.81
CCNFP41002 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.14■□□□□ 0.81
CCNFP41002 AL691432.2-201ENST00000607222 2038 ntBASIC20.14■□□□□ 0.81
CCNFP41002 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCNFP41002 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.14■□□□□ 0.81
CCNFP41002 DPP3P2-201ENST00000416030 1696 ntBASIC20.14■□□□□ 0.81
CCNFP41002 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.14■□□□□ 0.81
CCNFP41002 AC004911.1-201ENST00000416316 871 ntBASIC20.14■□□□□ 0.81
CCNFP41002 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.14■□□□□ 0.81
CCNFP41002 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.14■□□□□ 0.81
CCNFP41002 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.14■□□□□ 0.81
CCNFP41002 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCNFP41002 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCNFP41002 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCNFP41002 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCNFP41002 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCNFP41002 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCNFP41002 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CCNFP41002 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.13■□□□□ 0.81
CCNFP41002 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCNFP41002 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCNFP41002 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.13■□□□□ 0.81
CCNFP41002 AC080038.1-201ENST00000611274 1154 ntBASIC20.13■□□□□ 0.81
CCNFP41002 AC092666.2-201ENST00000613287 246 ntBASIC20.13■□□□□ 0.81
CCNFP41002 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CCNFP41002 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.13■□□□□ 0.81
CCNFP41002 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCNFP41002 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCNFP41002 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCNFP41002 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCNFP41002 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
CCNFP41002 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms