Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
LSP1P33241 AL390961.4-201ENST00000623958 2535 ntBASIC20.14■□□□□ 0.81
LSP1P33241 AC009113.1-201ENST00000570267 2443 ntBASIC20.14■□□□□ 0.81
LSP1P33241 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.14■□□□□ 0.81
LSP1P33241 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LSP1P33241 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LSP1P33241 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LSP1P33241 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.14■□□□□ 0.81
LSP1P33241 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LSP1P33241 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.14■□□□□ 0.81
LSP1P33241 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LSP1P33241 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.14■□□□□ 0.81
LSP1P33241 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.13■□□□□ 0.81
LSP1P33241 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSP1P33241 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSP1P33241 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSP1P33241 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSP1P33241 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
LSP1P33241 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSP1P33241 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
LSP1P33241 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.13■□□□□ 0.81
LSP1P33241 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.13■□□□□ 0.81
LSP1P33241 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.13■□□□□ 0.81
LSP1P33241 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSP1P33241 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSP1P33241 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LSP1P33241 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.13■□□□□ 0.81
LSP1P33241 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.13■□□□□ 0.81
LSP1P33241 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.13■□□□□ 0.81
LSP1P33241 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSP1P33241 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.13■□□□□ 0.81
LSP1P33241 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.13■□□□□ 0.81
LSP1P33241 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.12■□□□□ 0.81
LSP1P33241 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.12■□□□□ 0.81
LSP1P33241 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.12■□□□□ 0.81
LSP1P33241 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSP1P33241 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LSP1P33241 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LSP1P33241 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.12■□□□□ 0.81
LSP1P33241 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.12■□□□□ 0.81
LSP1P33241 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSP1P33241 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LSP1P33241 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSP1P33241 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LSP1P33241 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSP1P33241 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSP1P33241 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LSP1P33241 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSP1P33241 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LSP1P33241 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.12■□□□□ 0.81
LSP1P33241 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.12■□□□□ 0.81
LSP1P33241 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
LSP1P33241 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSP1P33241 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.11■□□□□ 0.81
LSP1P33241 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.11■□□□□ 0.81
LSP1P33241 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSP1P33241 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
LSP1P33241 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LSP1P33241 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LSP1P33241 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
LSP1P33241 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.11■□□□□ 0.81
LSP1P33241 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LSP1P33241 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LSP1P33241 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
LSP1P33241 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSP1P33241 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
LSP1P33241 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSP1P33241 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
LSP1P33241 AC239859.2-201ENST00000444165 318 ntBASIC20.11■□□□□ 0.81
LSP1P33241 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.11■□□□□ 0.81
LSP1P33241 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.11■□□□□ 0.81
LSP1P33241 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.11■□□□□ 0.81
LSP1P33241 SMUG1P1-201ENST00000590640 811 ntBASIC20.11■□□□□ 0.81
LSP1P33241 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.11■□□□□ 0.81
LSP1P33241 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSP1P33241 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LSP1P33241 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSP1P33241 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LSP1P33241 AL133373.2-201ENST00000623187 2828 ntBASIC20.11■□□□□ 0.81
LSP1P33241 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSP1P33241 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LSP1P33241 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.1■□□□□ 0.81
LSP1P33241 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LSP1P33241 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSP1P33241 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSP1P33241 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSP1P33241 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSP1P33241 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.1■□□□□ 0.81
LSP1P33241 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LSP1P33241 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSP1P33241 AC020916.1-201ENST00000587762 1774 ntBASIC20.1■□□□□ 0.81
LSP1P33241 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.1■□□□□ 0.81
LSP1P33241 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSP1P33241 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.1■□□□□ 0.81
LSP1P33241 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
LSP1P33241 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSP1P33241 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSP1P33241 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LSP1P33241 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSP1P33241 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms