Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.08■□□□□ 0.48
APEX1P27695 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.08■□□□□ 0.48
APEX1P27695 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
APEX1P27695 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
APEX1P27695 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
APEX1P27695 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.08■□□□□ 0.48
APEX1P27695 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
APEX1P27695 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
APEX1P27695 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.07■□□□□ 0.48
APEX1P27695 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.07■□□□□ 0.48
APEX1P27695 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APEX1P27695 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.07■□□□□ 0.48
APEX1P27695 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
APEX1P27695 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
APEX1P27695 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.07■□□□□ 0.48
APEX1P27695 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.07■□□□□ 0.48
APEX1P27695 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.07■□□□□ 0.48
APEX1P27695 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
APEX1P27695 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
APEX1P27695 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
APEX1P27695 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
APEX1P27695 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.07■□□□□ 0.48
APEX1P27695 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APEX1P27695 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
APEX1P27695 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APEX1P27695 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
APEX1P27695 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
APEX1P27695 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
APEX1P27695 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
APEX1P27695 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
APEX1P27695 AP000974.1-201ENST00000623909 2387 ntBASIC18.06■□□□□ 0.48
APEX1P27695 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.06■□□□□ 0.48
APEX1P27695 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
APEX1P27695 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
APEX1P27695 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
APEX1P27695 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.06■□□□□ 0.48
APEX1P27695 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.06■□□□□ 0.48
APEX1P27695 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.06■□□□□ 0.48
APEX1P27695 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.06■□□□□ 0.48
APEX1P27695 MFSD11-216ENST00000590393 1141 ntBASIC18.06■□□□□ 0.48
APEX1P27695 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.06■□□□□ 0.48
APEX1P27695 BID-214ENST00000617586 542 ntTSL 5 BASIC18.06■□□□□ 0.48
APEX1P27695 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
APEX1P27695 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
APEX1P27695 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.06■□□□□ 0.48
APEX1P27695 AC004408.2-201ENST00000623613 2777 ntBASIC18.06■□□□□ 0.48
APEX1P27695 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
APEX1P27695 RBM17P2-201ENST00000616397 1405 ntBASIC18.06■□□□□ 0.48
APEX1P27695 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.06■□□□□ 0.48
APEX1P27695 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
APEX1P27695 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
APEX1P27695 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
APEX1P27695 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
APEX1P27695 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
APEX1P27695 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.05■□□□□ 0.48
APEX1P27695 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.05■□□□□ 0.48
APEX1P27695 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APEX1P27695 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.05■□□□□ 0.48
APEX1P27695 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APEX1P27695 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
APEX1P27695 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
APEX1P27695 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.05■□□□□ 0.48
APEX1P27695 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APEX1P27695 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
APEX1P27695 AC010536.3-201ENST00000620306 533 ntBASIC18.05■□□□□ 0.48
APEX1P27695 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.05■□□□□ 0.48
APEX1P27695 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
APEX1P27695 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
APEX1P27695 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APEX1P27695 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APEX1P27695 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APEX1P27695 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APEX1P27695 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APEX1P27695 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
APEX1P27695 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.04■□□□□ 0.48
APEX1P27695 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.04■□□□□ 0.48
APEX1P27695 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.04■□□□□ 0.48
APEX1P27695 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
APEX1P27695 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
APEX1P27695 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
APEX1P27695 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APEX1P27695 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
APEX1P27695 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.04■□□□□ 0.48
APEX1P27695 HLA-L-209ENST00000420110 1011 ntBASIC18.04■□□□□ 0.48
APEX1P27695 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
APEX1P27695 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.04■□□□□ 0.48
APEX1P27695 AC011767.1-201ENST00000617410 1153 ntBASIC18.04■□□□□ 0.48
APEX1P27695 AC073111.5-205ENST00000641717 521 ntBASIC18.04■□□□□ 0.48
APEX1P27695 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APEX1P27695 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
APEX1P27695 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
APEX1P27695 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APEX1P27695 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.04■□□□□ 0.48
APEX1P27695 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APEX1P27695 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APEX1P27695 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.04■□□□□ 0.48
APEX1P27695 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APEX1P27695 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APEX1P27695 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.03■□□□□ 0.48
APEX1P27695 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms