Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.86■□□□□ 0.29
CD74P04233 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.86■□□□□ 0.29
CD74P04233 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.86■□□□□ 0.29
CD74P04233 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.86■□□□□ 0.29
CD74P04233 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CD74P04233 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.86■□□□□ 0.29
CD74P04233 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.86■□□□□ 0.29
CD74P04233 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.86■□□□□ 0.29
CD74P04233 LINC01465-201ENST00000408887 1940 ntBASIC16.86■□□□□ 0.29
CD74P04233 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.86■□□□□ 0.29
CD74P04233 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CD74P04233 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD74P04233 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD74P04233 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CD74P04233 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD74P04233 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.85■□□□□ 0.29
CD74P04233 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD74P04233 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD74P04233 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.85■□□□□ 0.29
CD74P04233 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD74P04233 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.85■□□□□ 0.29
CD74P04233 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.85■□□□□ 0.29
CD74P04233 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.85■□□□□ 0.29
CD74P04233 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.85■□□□□ 0.29
CD74P04233 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.85■□□□□ 0.29
CD74P04233 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CD74P04233 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.85■□□□□ 0.29
CD74P04233 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD74P04233 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.85■□□□□ 0.29
CD74P04233 AL032819.2-201ENST00000624543 2162 ntBASIC16.85■□□□□ 0.29
CD74P04233 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD74P04233 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD74P04233 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.85■□□□□ 0.29
CD74P04233 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD74P04233 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.85■□□□□ 0.29
CD74P04233 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD74P04233 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD74P04233 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.85■□□□□ 0.29
CD74P04233 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD74P04233 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.84■□□□□ 0.29
CD74P04233 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD74P04233 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD74P04233 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD74P04233 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CD74P04233 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.84■□□□□ 0.29
CD74P04233 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD74P04233 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD74P04233 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CD74P04233 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD74P04233 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD74P04233 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CD74P04233 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CD74P04233 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.84■□□□□ 0.29
CD74P04233 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.84■□□□□ 0.29
CD74P04233 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD74P04233 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CD74P04233 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.84■□□□□ 0.29
CD74P04233 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD74P04233 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.84■□□□□ 0.29
CD74P04233 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.84■□□□□ 0.29
CD74P04233 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD74P04233 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD74P04233 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CD74P04233 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD74P04233 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD74P04233 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD74P04233 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.84■□□□□ 0.29
CD74P04233 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CD74P04233 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CD74P04233 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CD74P04233 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD74P04233 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD74P04233 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD74P04233 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD74P04233 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD74P04233 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD74P04233 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CD74P04233 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.83■□□□□ 0.28
CD74P04233 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CD74P04233 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.83■□□□□ 0.28
CD74P04233 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD74P04233 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CD74P04233 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.83■□□□□ 0.28
CD74P04233 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD74P04233 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CD74P04233 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CD74P04233 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD74P04233 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD74P04233 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms