Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LMNAP02545 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMNAP02545 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.9■□□□□ 0.94
LMNAP02545 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LMNAP02545 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMNAP02545 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMNAP02545 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMNAP02545 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LMNAP02545 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMNAP02545 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMNAP02545 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.89■□□□□ 0.93
LMNAP02545 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.89■□□□□ 0.93
LMNAP02545 TSPY15P-201ENST00000457163 923 ntBASIC20.89■□□□□ 0.93
LMNAP02545 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMNAP02545 PRKY-204ENST00000533551 1019 ntBASIC20.89■□□□□ 0.93
LMNAP02545 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
LMNAP02545 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.89■□□□□ 0.93
LMNAP02545 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMNAP02545 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.89■□□□□ 0.93
LMNAP02545 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMNAP02545 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMNAP02545 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.89■□□□□ 0.93
LMNAP02545 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMNAP02545 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.89■□□□□ 0.93
LMNAP02545 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
LMNAP02545 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMNAP02545 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.88■□□□□ 0.93
LMNAP02545 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.88■□□□□ 0.93
LMNAP02545 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.88■□□□□ 0.93
LMNAP02545 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LMNAP02545 AF106564.1-201ENST00000607058 2553 ntBASIC20.88■□□□□ 0.93
LMNAP02545 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LMNAP02545 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
LMNAP02545 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.88■□□□□ 0.93
LMNAP02545 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMNAP02545 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
LMNAP02545 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.88■□□□□ 0.93
LMNAP02545 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.88■□□□□ 0.93
LMNAP02545 AL049597.2-201ENST00000565575 961 ntBASIC20.88■□□□□ 0.93
LMNAP02545 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.88■□□□□ 0.93
LMNAP02545 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.88■□□□□ 0.93
LMNAP02545 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMNAP02545 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMNAP02545 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMNAP02545 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMNAP02545 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LMNAP02545 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMNAP02545 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LMNAP02545 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LMNAP02545 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
LMNAP02545 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.88■□□□□ 0.93
LMNAP02545 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LMNAP02545 AL135905.2-201ENST00000584934 1404 ntBASIC20.87■□□□□ 0.93
LMNAP02545 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.87■□□□□ 0.93
LMNAP02545 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LMNAP02545 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LMNAP02545 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.87■□□□□ 0.93
LMNAP02545 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LMNAP02545 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.87■□□□□ 0.93
LMNAP02545 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.87■□□□□ 0.93
LMNAP02545 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.87■□□□□ 0.93
LMNAP02545 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
LMNAP02545 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LMNAP02545 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LMNAP02545 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LMNAP02545 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.87■□□□□ 0.93
LMNAP02545 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LMNAP02545 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LMNAP02545 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.87■□□□□ 0.93
LMNAP02545 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.87■□□□□ 0.93
LMNAP02545 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMNAP02545 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMNAP02545 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
LMNAP02545 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LMNAP02545 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
LMNAP02545 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LMNAP02545 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMNAP02545 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMNAP02545 POM121L13P-201ENST00000422362 380 ntBASIC20.86■□□□□ 0.93
LMNAP02545 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.86■□□□□ 0.93
LMNAP02545 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.86■□□□□ 0.93
LMNAP02545 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LMNAP02545 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.86■□□□□ 0.93
LMNAP02545 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LMNAP02545 AL589743.5-201ENST00000616611 1050 ntBASIC20.86■□□□□ 0.93
LMNAP02545 AC100791.3-201ENST00000617619 330 ntBASIC20.86■□□□□ 0.93
LMNAP02545 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.86■□□□□ 0.93
LMNAP02545 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMNAP02545 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LMNAP02545 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMNAP02545 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMNAP02545 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMNAP02545 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.85■□□□□ 0.93
LMNAP02545 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMNAP02545 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMNAP02545 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMNAP02545 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
LMNAP02545 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.85■□□□□ 0.93
LMNAP02545 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.85■□□□□ 0.93
LMNAP02545 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms