Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CLPTM1O96005 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CLPTM1O96005 AC093484.2-201ENST00000580996 2166 ntBASIC18.89■□□□□ 0.62
CLPTM1O96005 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CLPTM1O96005 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLPTM1O96005 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLPTM1O96005 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CLPTM1O96005 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.89■□□□□ 0.61
CLPTM1O96005 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLPTM1O96005 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLPTM1O96005 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.89■□□□□ 0.61
CLPTM1O96005 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.89■□□□□ 0.61
CLPTM1O96005 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CLPTM1O96005 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.89■□□□□ 0.61
CLPTM1O96005 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLPTM1O96005 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLPTM1O96005 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLPTM1O96005 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLPTM1O96005 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.89■□□□□ 0.61
CLPTM1O96005 RASA4CP-201ENST00000424092 1398 ntBASIC18.89■□□□□ 0.61
CLPTM1O96005 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLPTM1O96005 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLPTM1O96005 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLPTM1O96005 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.89■□□□□ 0.61
CLPTM1O96005 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CLPTM1O96005 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.89■□□□□ 0.61
CLPTM1O96005 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CLPTM1O96005 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.88■□□□□ 0.61
CLPTM1O96005 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLPTM1O96005 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLPTM1O96005 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLPTM1O96005 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLPTM1O96005 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.88■□□□□ 0.61
CLPTM1O96005 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLPTM1O96005 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLPTM1O96005 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLPTM1O96005 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CLPTM1O96005 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.88■□□□□ 0.61
CLPTM1O96005 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.88■□□□□ 0.61
CLPTM1O96005 AC126544.1-201ENST00000580842 1059 ntBASIC18.88■□□□□ 0.61
CLPTM1O96005 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.88■□□□□ 0.61
CLPTM1O96005 AL031602.1-201ENST00000633169 911 ntBASIC18.88■□□□□ 0.61
CLPTM1O96005 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLPTM1O96005 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLPTM1O96005 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLPTM1O96005 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.88■□□□□ 0.61
CLPTM1O96005 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLPTM1O96005 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLPTM1O96005 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLPTM1O96005 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.88■□□□□ 0.61
CLPTM1O96005 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.88■□□□□ 0.61
CLPTM1O96005 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLPTM1O96005 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLPTM1O96005 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPTM1O96005 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CLPTM1O96005 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPTM1O96005 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CLPTM1O96005 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLPTM1O96005 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPTM1O96005 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CLPTM1O96005 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPTM1O96005 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPTM1O96005 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CLPTM1O96005 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPTM1O96005 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPTM1O96005 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLPTM1O96005 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CLPTM1O96005 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLPTM1O96005 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.87■□□□□ 0.61
CLPTM1O96005 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CLPTM1O96005 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CLPTM1O96005 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPTM1O96005 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPTM1O96005 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLPTM1O96005 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPTM1O96005 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLPTM1O96005 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLPTM1O96005 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLPTM1O96005 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLPTM1O96005 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLPTM1O96005 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.86■□□□□ 0.61
CLPTM1O96005 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CLPTM1O96005 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLPTM1O96005 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLPTM1O96005 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.86■□□□□ 0.61
CLPTM1O96005 AC105265.2-201ENST00000467189 838 ntBASIC18.86■□□□□ 0.61
CLPTM1O96005 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.86■□□□□ 0.61
CLPTM1O96005 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLPTM1O96005 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLPTM1O96005 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLPTM1O96005 FZD10-202ENST00000539839 3282 ntBASIC18.86■□□□□ 0.61
CLPTM1O96005 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.86■□□□□ 0.61
CLPTM1O96005 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLPTM1O96005 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLPTM1O96005 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPTM1O96005 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPTM1O96005 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.85■□□□□ 0.61
CLPTM1O96005 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLPTM1O96005 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CLPTM1O96005 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms