Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM3O75382 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM3O75382 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.67■□□□□ 0.58
TRIM3O75382 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM3O75382 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM3O75382 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM3O75382 CD99P1-205ENST00000527459 561 ntBASIC18.67■□□□□ 0.58
TRIM3O75382 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM3O75382 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM3O75382 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM3O75382 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM3O75382 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM3O75382 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM3O75382 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM3O75382 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM3O75382 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM3O75382 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRIM3O75382 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM3O75382 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM3O75382 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM3O75382 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM3O75382 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM3O75382 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM3O75382 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.66■□□□□ 0.58
TRIM3O75382 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM3O75382 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.66■□□□□ 0.58
TRIM3O75382 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.66■□□□□ 0.58
TRIM3O75382 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.66■□□□□ 0.58
TRIM3O75382 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.66■□□□□ 0.58
TRIM3O75382 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM3O75382 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM3O75382 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM3O75382 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM3O75382 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM3O75382 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM3O75382 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM3O75382 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRIM3O75382 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM3O75382 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM3O75382 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM3O75382 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM3O75382 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM3O75382 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM3O75382 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM3O75382 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM3O75382 AC105020.6-201ENST00000621523 1217 ntBASIC18.65■□□□□ 0.58
TRIM3O75382 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRIM3O75382 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRIM3O75382 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM3O75382 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM3O75382 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM3O75382 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM3O75382 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM3O75382 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.64■□□□□ 0.58
TRIM3O75382 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.64■□□□□ 0.58
TRIM3O75382 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM3O75382 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM3O75382 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM3O75382 PGM5P4-201ENST00000421970 445 ntBASIC18.64■□□□□ 0.57
TRIM3O75382 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM3O75382 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM3O75382 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM3O75382 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRIM3O75382 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM3O75382 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM3O75382 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM3O75382 AC006128.1-201ENST00000624704 1661 ntBASIC18.63■□□□□ 0.57
TRIM3O75382 AC121338.2-201ENST00000622535 1744 ntBASIC18.63■□□□□ 0.57
TRIM3O75382 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRIM3O75382 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM3O75382 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM3O75382 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRIM3O75382 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM3O75382 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM3O75382 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM3O75382 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.63■□□□□ 0.57
TRIM3O75382 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM3O75382 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM3O75382 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM3O75382 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM3O75382 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRIM3O75382 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRIM3O75382 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM3O75382 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM3O75382 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TRIM3O75382 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM3O75382 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRIM3O75382 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM3O75382 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRIM3O75382 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRIM3O75382 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM3O75382 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM3O75382 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIM3O75382 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM3O75382 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM3O75382 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM3O75382 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM3O75382 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM3O75382 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TRIM3O75382 AC027702.1-201ENST00000563810 1770 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms