Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNAI2O43623 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNAI2O43623 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNAI2O43623 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNAI2O43623 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNAI2O43623 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNAI2O43623 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.96□□□□□ -0.01
SNAI2O43623 NEFHP1-201ENST00000412845 2629 ntBASIC14.96□□□□□ -0.01
SNAI2O43623 AL356441.2-201ENST00000443009 864 ntBASIC14.96□□□□□ -0.01
SNAI2O43623 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNAI2O43623 AC061975.6-201ENST00000579045 1553 ntBASIC14.96□□□□□ -0.01
SNAI2O43623 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.96□□□□□ -0.01
SNAI2O43623 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNAI2O43623 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.96□□□□□ -0.01
SNAI2O43623 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SNAI2O43623 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
SNAI2O43623 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.96□□□□□ -0.02
SNAI2O43623 AP000974.1-201ENST00000623909 2387 ntBASIC14.96□□□□□ -0.02
SNAI2O43623 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SNAI2O43623 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SNAI2O43623 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SNAI2O43623 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SNAI2O43623 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SNAI2O43623 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SNAI2O43623 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SNAI2O43623 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.95□□□□□ -0.02
SNAI2O43623 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SNAI2O43623 BX323043.1-201ENST00000641006 1765 ntBASIC14.95□□□□□ -0.02
SNAI2O43623 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.95□□□□□ -0.02
SNAI2O43623 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNAI2O43623 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.94□□□□□ -0.02
SNAI2O43623 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.94□□□□□ -0.02
SNAI2O43623 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNAI2O43623 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNAI2O43623 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
SNAI2O43623 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNAI2O43623 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNAI2O43623 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNAI2O43623 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNAI2O43623 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.94□□□□□ -0.02
SNAI2O43623 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNAI2O43623 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNAI2O43623 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.94□□□□□ -0.02
SNAI2O43623 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNAI2O43623 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNAI2O43623 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SNAI2O43623 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SNAI2O43623 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNAI2O43623 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SNAI2O43623 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNAI2O43623 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNAI2O43623 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNAI2O43623 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNAI2O43623 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNAI2O43623 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.93□□□□□ -0.02
SNAI2O43623 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNAI2O43623 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNAI2O43623 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNAI2O43623 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNAI2O43623 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.93□□□□□ -0.02
SNAI2O43623 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNAI2O43623 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNAI2O43623 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNAI2O43623 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.93□□□□□ -0.02
SNAI2O43623 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNAI2O43623 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.93□□□□□ -0.02
SNAI2O43623 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNAI2O43623 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNAI2O43623 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNAI2O43623 AC005332.8-201ENST00000622750 2735 ntBASIC14.93□□□□□ -0.02
SNAI2O43623 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNAI2O43623 AC116562.4-201ENST00000641316 2276 ntBASIC14.93□□□□□ -0.02
SNAI2O43623 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNAI2O43623 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.93□□□□□ -0.02
SNAI2O43623 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNAI2O43623 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.93□□□□□ -0.02
SNAI2O43623 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNAI2O43623 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms