Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC011506.1-201ENST00000474329 610 ntBASIC22.12■■□□□ 1.13
TNRC18O15417 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TNRC18O15417 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.12■■□□□ 1.13
TNRC18O15417 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
TNRC18O15417 AC007663.1-201ENST00000438948 1240 ntBASIC22.12■■□□□ 1.13
TNRC18O15417 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
TNRC18O15417 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TNRC18O15417 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.12■■□□□ 1.13
TNRC18O15417 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
TNRC18O15417 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.11■■□□□ 1.13
TNRC18O15417 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TNRC18O15417 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TNRC18O15417 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TNRC18O15417 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.11■■□□□ 1.13
TNRC18O15417 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
TNRC18O15417 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TNRC18O15417 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TNRC18O15417 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC22.11■■□□□ 1.13
TNRC18O15417 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TNRC18O15417 AL136038.3-201ENST00000561909 1096 ntBASIC22.11■■□□□ 1.13
TNRC18O15417 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.11■■□□□ 1.13
TNRC18O15417 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.1■■□□□ 1.13
TNRC18O15417 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
TNRC18O15417 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TNRC18O15417 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TNRC18O15417 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TNRC18O15417 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
TNRC18O15417 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
TNRC18O15417 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.1■■□□□ 1.13
TNRC18O15417 AC092329.2-201ENST00000598402 547 ntBASIC22.1■■□□□ 1.13
TNRC18O15417 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TNRC18O15417 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
TNRC18O15417 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TNRC18O15417 ZNF444P1-201ENST00000559497 298 ntBASIC22.09■■□□□ 1.13
TNRC18O15417 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TNRC18O15417 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TNRC18O15417 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
TNRC18O15417 PMS2P2-201ENST00000425039 1128 ntBASIC22.09■■□□□ 1.13
TNRC18O15417 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TNRC18O15417 AC138932.3-201ENST00000567634 1902 ntBASIC22.09■■□□□ 1.13
TNRC18O15417 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TNRC18O15417 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TNRC18O15417 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TNRC18O15417 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TNRC18O15417 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TNRC18O15417 COX10-202ENST00000429152 875 ntTSL 2 BASIC22.08■■□□□ 1.13
TNRC18O15417 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC22.08■■□□□ 1.13
TNRC18O15417 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TNRC18O15417 AL356652.1-201ENST00000615962 565 ntBASIC22.08■■□□□ 1.13
TNRC18O15417 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TNRC18O15417 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
TNRC18O15417 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TNRC18O15417 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
TNRC18O15417 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TNRC18O15417 MIR1233-2-201ENST00000408138 82 ntBASIC22.08■■□□□ 1.13
TNRC18O15417 MIR1233-1-201ENST00000408722 82 ntBASIC22.08■■□□□ 1.13
TNRC18O15417 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.08■■□□□ 1.13
TNRC18O15417 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.08■■□□□ 1.13
TNRC18O15417 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TNRC18O15417 MRPL3P1-201ENST00000400109 1033 ntBASIC22.08■■□□□ 1.12
TNRC18O15417 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TNRC18O15417 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.08■■□□□ 1.12
TNRC18O15417 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
TNRC18O15417 AF228730.7-201ENST00000641842 219 ntBASIC22.08■■□□□ 1.12
TNRC18O15417 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TNRC18O15417 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TNRC18O15417 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TNRC18O15417 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TNRC18O15417 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TNRC18O15417 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TNRC18O15417 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
TNRC18O15417 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
TNRC18O15417 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TNRC18O15417 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC22.07■■□□□ 1.12
TNRC18O15417 AC087742.1-201ENST00000575880 1738 ntBASIC22.07■■□□□ 1.12
TNRC18O15417 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TNRC18O15417 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TNRC18O15417 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TNRC18O15417 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC22.07■■□□□ 1.12
TNRC18O15417 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TNRC18O15417 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.07■■□□□ 1.12
TNRC18O15417 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.07■■□□□ 1.12
TNRC18O15417 AL445675.2-201ENST00000620291 557 ntBASIC22.07■■□□□ 1.12
TNRC18O15417 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TNRC18O15417 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TNRC18O15417 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TNRC18O15417 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC22.06■■□□□ 1.12
TNRC18O15417 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.06■■□□□ 1.12
TNRC18O15417 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.06■■□□□ 1.12
TNRC18O15417 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TNRC18O15417 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.06■■□□□ 1.12
TNRC18O15417 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.06■■□□□ 1.12
TNRC18O15417 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
TNRC18O15417 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.06■■□□□ 1.12
TNRC18O15417 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.06■■□□□ 1.12
TNRC18O15417 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC22.06■■□□□ 1.12
TNRC18O15417 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TNRC18O15417 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
TNRC18O15417 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.06■■□□□ 1.12
TNRC18O15417 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms