Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.52■□□□□ 0.72
HDAC3O15379 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.52■□□□□ 0.72
HDAC3O15379 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.52■□□□□ 0.72
HDAC3O15379 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.52■□□□□ 0.72
HDAC3O15379 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC3O15379 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC3O15379 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.52■□□□□ 0.72
HDAC3O15379 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
HDAC3O15379 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC3O15379 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC3O15379 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.52■□□□□ 0.72
HDAC3O15379 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
HDAC3O15379 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
HDAC3O15379 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HDAC3O15379 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HDAC3O15379 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.52■□□□□ 0.71
HDAC3O15379 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HDAC3O15379 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HDAC3O15379 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HDAC3O15379 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
HDAC3O15379 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.51■□□□□ 0.71
HDAC3O15379 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HDAC3O15379 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.51■□□□□ 0.71
HDAC3O15379 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.51■□□□□ 0.71
HDAC3O15379 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.51■□□□□ 0.71
HDAC3O15379 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.51■□□□□ 0.71
HDAC3O15379 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.51■□□□□ 0.71
HDAC3O15379 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
HDAC3O15379 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.51■□□□□ 0.71
HDAC3O15379 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HDAC3O15379 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.51■□□□□ 0.71
HDAC3O15379 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
HDAC3O15379 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
HDAC3O15379 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HDAC3O15379 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
HDAC3O15379 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.51■□□□□ 0.71
HDAC3O15379 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HDAC3O15379 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HDAC3O15379 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.51■□□□□ 0.71
HDAC3O15379 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HDAC3O15379 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HDAC3O15379 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.5■□□□□ 0.71
HDAC3O15379 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.5■□□□□ 0.71
HDAC3O15379 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.5■□□□□ 0.71
HDAC3O15379 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HDAC3O15379 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HDAC3O15379 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HDAC3O15379 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HDAC3O15379 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HDAC3O15379 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HDAC3O15379 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
HDAC3O15379 AC027612.3-201ENST00000413684 1047 ntBASIC19.5■□□□□ 0.71
HDAC3O15379 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HDAC3O15379 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.5■□□□□ 0.71
HDAC3O15379 AC004408.2-201ENST00000623613 2777 ntBASIC19.5■□□□□ 0.71
HDAC3O15379 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.5■□□□□ 0.71
HDAC3O15379 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HDAC3O15379 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HDAC3O15379 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HDAC3O15379 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.5■□□□□ 0.71
HDAC3O15379 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HDAC3O15379 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.5■□□□□ 0.71
HDAC3O15379 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.5■□□□□ 0.71
HDAC3O15379 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HDAC3O15379 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HDAC3O15379 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.5■□□□□ 0.71
HDAC3O15379 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC3O15379 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC3O15379 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.49■□□□□ 0.71
HDAC3O15379 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC3O15379 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HDAC3O15379 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC3O15379 LINC02228-203ENST00000641970 1355 ntBASIC19.49■□□□□ 0.71
HDAC3O15379 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC3O15379 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC3O15379 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.49■□□□□ 0.71
HDAC3O15379 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
HDAC3O15379 SLC7A5P1-201ENST00000568957 537 ntBASIC19.49■□□□□ 0.71
HDAC3O15379 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC3O15379 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC3O15379 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC3O15379 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC3O15379 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC3O15379 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC3O15379 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.49■□□□□ 0.71
HDAC3O15379 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.49■□□□□ 0.71
HDAC3O15379 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.49■□□□□ 0.71
HDAC3O15379 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC3O15379 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC3O15379 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.48■□□□□ 0.71
HDAC3O15379 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HDAC3O15379 Z82202.1-201ENST00000623446 1880 ntBASIC19.48■□□□□ 0.71
HDAC3O15379 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.48■□□□□ 0.71
HDAC3O15379 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC3O15379 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC3O15379 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
HDAC3O15379 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.48■□□□□ 0.71
HDAC3O15379 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC3O15379 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC3O15379 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms