Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM238C9JI98 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 ASB1-202ENST00000409297 878 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM238C9JI98 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238C9JI98 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.09□□□□□ -0.15
TMEM238C9JI98 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM238C9JI98 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM238C9JI98 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 GUK1-208ENST00000366728 842 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM238C9JI98 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.09□□□□□ -0.15
TMEM238C9JI98 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.09□□□□□ -0.15
TMEM238C9JI98 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM238C9JI98 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TMEM238C9JI98 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TMEM238C9JI98 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238C9JI98 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM238C9JI98 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM238C9JI98 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM238C9JI98 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM238C9JI98 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.08□□□□□ -0.15
TMEM238C9JI98 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
TMEM238C9JI98 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM238C9JI98 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
TMEM238C9JI98 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.08□□□□□ -0.15
TMEM238C9JI98 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC14.08□□□□□ -0.15
TMEM238C9JI98 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC14.08□□□□□ -0.15
TMEM238C9JI98 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM238C9JI98 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM238C9JI98 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TMEM238C9JI98 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM238C9JI98 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TMEM238C9JI98 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
TMEM238C9JI98 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM238C9JI98 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM238C9JI98 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TMEM238C9JI98 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM238C9JI98 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238C9JI98 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238C9JI98 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.16
TMEM238C9JI98 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.08□□□□□ -0.16
TMEM238C9JI98 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238C9JI98 EI24-211ENST00000534546 1544 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM238C9JI98 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238C9JI98 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238C9JI98 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.08□□□□□ -0.16
TMEM238C9JI98 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
TMEM238C9JI98 AC007225.1-201ENST00000566331 1836 ntBASIC14.08□□□□□ -0.16
TMEM238C9JI98 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM238C9JI98 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238C9JI98 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238C9JI98 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238C9JI98 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238C9JI98 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms