Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRRM3A6NNA2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SRRM3A6NNA2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.76■□□□□ 0.91
SRRM3A6NNA2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 FAM210CP-201ENST00000445714 574 ntBASIC20.75■□□□□ 0.91
SRRM3A6NNA2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.75■□□□□ 0.91
SRRM3A6NNA2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 AC142381.4-202ENST00000563973 229 ntBASIC20.74■□□□□ 0.91
SRRM3A6NNA2 MIR4758-201ENST00000577688 71 ntBASIC20.74■□□□□ 0.91
SRRM3A6NNA2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRRM3A6NNA2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRRM3A6NNA2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.73■□□□□ 0.91
SRRM3A6NNA2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRRM3A6NNA2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.73■□□□□ 0.91
SRRM3A6NNA2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SRRM3A6NNA2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SRRM3A6NNA2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRRM3A6NNA2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRRM3A6NNA2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SRRM3A6NNA2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.73■□□□□ 0.91
SRRM3A6NNA2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRRM3A6NNA2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.73■□□□□ 0.91
SRRM3A6NNA2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRRM3A6NNA2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRRM3A6NNA2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRRM3A6NNA2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 AC005332.7-201ENST00000614046 2005 ntBASIC20.72■□□□□ 0.91
SRRM3A6NNA2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 ECEL1P3-201ENST00000427961 737 ntBASIC20.72■□□□□ 0.91
SRRM3A6NNA2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 AC026471.1-201ENST00000564629 3026 ntBASIC20.72■□□□□ 0.91
SRRM3A6NNA2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.72■□□□□ 0.91
SRRM3A6NNA2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 AC133552.2-202ENST00000575694 574 ntBASIC20.71■□□□□ 0.91
SRRM3A6NNA2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms