Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 NOTUM-204ENST00000489218 972 ntTSL 216.07■□□□□ 0.163e-28■■□□□ 12.1
PRPF8Q6P2Q9 NUMA1-217ENST00000540626 2276 ntTSL 211.03□□□□□ -0.642e-6■■□□□ 12.1
PRPF8Q6P2Q9 DHPS-210ENST00000595912 895 ntTSL 215.35■□□□□ 0.055e-7■■□□□ 12.1
PRPF8Q6P2Q9 DHPS-213ENST00000597152 605 ntTSL 59.57□□□□□ -0.885e-7■■□□□ 12.1
PRPF8Q6P2Q9 DHPS-215ENST00000598850 677 ntTSL 57.3□□□□□ -1.245e-7■■□□□ 12.1
PRPF8Q6P2Q9 DHPS-217ENST00000600451 498 ntTSL 37.15□□□□□ -1.275e-7■■□□□ 12.1
PRPF8Q6P2Q9 MTG2-207ENST00000471352 785 ntTSL 513.74□□□□□ -0.212e-10■■□□□ 12.1
PRPF8Q6P2Q9 CLCN7-212ENST00000567789 577 ntTSL 216.61■□□□□ 0.252e-7■■□□□ 12.1
PRPF8Q6P2Q9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.21□□□□□ -0.291e-6■■□□□ 12.1
PRPF8Q6P2Q9 AC215219.1-201ENST00000400706 1817 ntBASIC11.64□□□□□ -0.551e-8■■□□□ 12
PRPF8Q6P2Q9 ESRP2-204ENST00000562724 478 ntTSL 315.77■□□□□ 0.112e-7■■□□□ 12
PRPF8Q6P2Q9 ESRP2-207ENST00000564382 592 ntTSL 412.89□□□□□ -0.352e-7■■□□□ 12
PRPF8Q6P2Q9 ESRP2-208ENST00000564465 734 ntTSL 310.15□□□□□ -0.792e-7■■□□□ 12
PRPF8Q6P2Q9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.3□□□□□ -0.122e-10■■□□□ 12
PRPF8Q6P2Q9 NRBP1-207ENST00000486701 813 ntTSL 37.3□□□□□ -1.248e-7■■□□□ 12
PRPF8Q6P2Q9 GCDH-204ENST00000585760 475 ntTSL 212.32□□□□□ -0.441e-6■■□□□ 12
PRPF8Q6P2Q9 UBE2D2-206ENST00000510470 256 ntTSL 27.66□□□□□ -1.182e-12■■□□□ 12
PRPF8Q6P2Q9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.846e-8■■□□□ 12
PRPF8Q6P2Q9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.436e-8■■□□□ 12
PRPF8Q6P2Q9 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.686e-8■■□□□ 12
PRPF8Q6P2Q9 USP53-208ENST00000514305 504 ntTSL 216.94■□□□□ 0.32e-16■■□□□ 12
PRPF8Q6P2Q9 USP53-203ENST00000507597 503 ntTSL 316.48■□□□□ 0.232e-16■■□□□ 12
PRPF8Q6P2Q9 USP53-209ENST00000514665 4233 ntTSL 1 (best)10.97□□□□□ -0.652e-16■■□□□ 12
PRPF8Q6P2Q9 USP53-201ENST00000274030 5936 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.92e-16■■□□□ 12
PRPF8Q6P2Q9 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.432e-6■■□□□ 12
PRPF8Q6P2Q9 ICA1-217ENST00000486677 322 ntTSL 518.76■□□□□ 0.594e-6■■□□□ 12
PRPF8Q6P2Q9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.58■□□□□ 0.084e-6■■□□□ 12
PRPF8Q6P2Q9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.24e-6■■□□□ 12
PRPF8Q6P2Q9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.54e-6■■□□□ 12
PRPF8Q6P2Q9 ICA1-213ENST00000455539 1956 ntTSL 1 (best)10.34□□□□□ -0.754e-6■■□□□ 12
PRPF8Q6P2Q9 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.794e-6■■□□□ 12
PRPF8Q6P2Q9 ICA1-209ENST00000422063 1539 ntTSL 1 (best) BASIC8.85□□□□□ -0.994e-6■■□□□ 12
PRPF8Q6P2Q9 ICA1-204ENST00000396675 2133 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.154e-6■■□□□ 12
PRPF8Q6P2Q9 ICA1-205ENST00000401396 1742 ntTSL 5 BASIC7.85□□□□□ -1.154e-6■■□□□ 12
PRPF8Q6P2Q9 ICA1-203ENST00000339809 1415 ntTSL 1 (best)6.21□□□□□ -1.424e-6■■□□□ 12
PRPF8Q6P2Q9 ICA1-202ENST00000317367 946 ntTSL 24.26□□□□□ -1.734e-6■■□□□ 12
PRPF8Q6P2Q9 RPL23A-207ENST00000578181 593 ntTSL 22.76□□□□□ -1.972e-10■■□□□ 12
PRPF8Q6P2Q9 ZMIZ2-211ENST00000480964 890 ntTSL 211.6□□□□□ -0.552e-7■■□□□ 12
PRPF8Q6P2Q9 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.842e-9■■□□□ 12
PRPF8Q6P2Q9 PAH-211ENST00000551114 1109 ntTSL 23.18□□□□□ -1.92e-9■■□□□ 12
PRPF8Q6P2Q9 PAH-216ENST00000635477 429 ntTSL 53.15□□□□□ -1.912e-9■■□□□ 12
PRPF8Q6P2Q9 ABCC1-207ENST00000575422 1198 ntTSL 513.73□□□□□ -0.214e-7■■□□□ 12
PRPF8Q6P2Q9 TM7SF2-224ENST00000533766 1547 ntTSL 516.4■□□□□ 0.221e-8■■□□□ 12
PRPF8Q6P2Q9 TM7SF2-225ENST00000534371 913 ntTSL 516.2■□□□□ 0.181e-8■■□□□ 12
PRPF8Q6P2Q9 TM7SF2-222ENST00000532328 560 ntTSL 313.46□□□□□ -0.251e-8■■□□□ 12
PRPF8Q6P2Q9 TUBB3-212ENST00000556565 566 ntTSL 414.92□□□□□ -0.022e-8■■□□□ 12
PRPF8Q6P2Q9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.36□□□□□ -0.112e-8■■□□□ 12
PRPF8Q6P2Q9 TUBB3-211ENST00000556536 925 ntTSL 314.23□□□□□ -0.132e-8■■□□□ 12
PRPF8Q6P2Q9 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.69□□□□□ -0.222e-8■■□□□ 12
PRPF8Q6P2Q9 TUBB3-213ENST00000557262 888 ntTSL 1 (best)13.69□□□□□ -0.222e-8■■□□□ 12
PRPF8Q6P2Q9 TUBB3-214ENST00000557490 806 ntTSL 513.43□□□□□ -0.262e-8■■□□□ 12
PRPF8Q6P2Q9 TUBB3-210ENST00000555810 767 ntTSL 313.07□□□□□ -0.322e-8■■□□□ 12
PRPF8Q6P2Q9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.322e-8■■□□□ 12
PRPF8Q6P2Q9 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.56□□□□□ -0.42e-8■■□□□ 12
PRPF8Q6P2Q9 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.42□□□□□ -0.422e-8■■□□□ 12
PRPF8Q6P2Q9 TUBB3-209ENST00000555609 1855 ntTSL 311.8□□□□□ -0.522e-8■■□□□ 12
PRPF8Q6P2Q9 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC11.66□□□□□ -0.542e-8■■□□□ 12
PRPF8Q6P2Q9 TUBB3-202ENST00000553656 550 ntTSL 411.49□□□□□ -0.572e-8■■□□□ 12
PRPF8Q6P2Q9 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.652e-8■■□□□ 12
PRPF8Q6P2Q9 SLC38A5-208ENST00000494034 525 ntTSL 58.54□□□□□ -1.044e-7■■□□□ 12
PRPF8Q6P2Q9 PLOD3-208ENST00000460132 578 ntTSL 312.42□□□□□ -0.422e-12■■□□□ 12
PRPF8Q6P2Q9 PLOD3-205ENST00000440925 536 ntTSL 412.16□□□□□ -0.462e-12■■□□□ 12
PRPF8Q6P2Q9 PLOD3-211ENST00000466881 661 ntTSL 29.59□□□□□ -0.874e-12■■□□□ 12
PRPF8Q6P2Q9 SF3B2-205ENST00000526653 329 ntTSL 24.95□□□□□ -1.624e-7■■□□□ 12
PRPF8Q6P2Q9 ASPSCR1-212ENST00000582019 1035 ntTSL 519.01■□□□□ 0.633e-13■■□□□ 12
PRPF8Q6P2Q9 CNP-205ENST00000486438 911 ntTSL 217.37■□□□□ 0.379e-8■■□□□ 12
PRPF8Q6P2Q9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.237e-7■■□□□ 12
PRPF8Q6P2Q9 CNP-210ENST00000592105 572 ntTSL 415.6■□□□□ 0.099e-8■■□□□ 12
PRPF8Q6P2Q9 MPV17L2-203ENST00000534421 548 ntTSL 215.52■□□□□ 0.087e-7■■□□□ 12
PRPF8Q6P2Q9 MPV17L2-201ENST00000532896 1676 ntTSL 215.11■□□□□ 0.017e-7■■□□□ 12
PRPF8Q6P2Q9 C1GALT1-206ENST00000467716 458 ntTSL 514.92□□□□□ -0.023e-7■■□□□ 12
PRPF8Q6P2Q9 MPV17L2-202ENST00000533807 1941 ntTSL 214.29□□□□□ -0.127e-7■■□□□ 12
PRPF8Q6P2Q9 INPP5D-214ENST00000496402 569 ntTSL 514.22□□□□□ -0.134e-10■■□□□ 12
PRPF8Q6P2Q9 INPP5D-205ENST00000451407 2545 ntTSL 212.89□□□□□ -0.354e-10■■□□□ 12
PRPF8Q6P2Q9 CDC42SE1-205ENST00000491825 837 ntTSL 212.76□□□□□ -0.374e-10■■□□□ 12
PRPF8Q6P2Q9 CDC42SE1-203ENST00000470278 939 ntTSL 512.48□□□□□ -0.414e-10■■□□□ 12
PRPF8Q6P2Q9 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.434e-10■■□□□ 12
PRPF8Q6P2Q9 SPOUT1-205ENST00000480366 661 ntTSL 212.11□□□□□ -0.479e-8■■□□□ 12
PRPF8Q6P2Q9 PARP10-209ENST00000527262 3027 ntTSL 1 (best)11.98□□□□□ -0.494e-10■■□□□ 12
PRPF8Q6P2Q9 PARP10-214ENST00000528963 581 ntTSL 211.08□□□□□ -0.644e-10■■□□□ 12
PRPF8Q6P2Q9 INPP5D-209ENST00000474278 568 ntTSL 510.97□□□□□ -0.654e-10■■□□□ 12
PRPF8Q6P2Q9 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.654e-10■■□□□ 12
PRPF8Q6P2Q9 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.744e-10■■□□□ 12
PRPF8Q6P2Q9 SCAMP3-203ENST00000462151 819 ntTSL 510.32□□□□□ -0.762e-9■■□□□ 12
PRPF8Q6P2Q9 TIMP2-205ENST00000592761 2433 ntTSL 1 (best)9.91□□□□□ -0.824e-10■■□□□ 12
PRPF8Q6P2Q9 GINS2-203ENST00000596233 537 ntTSL 39.72□□□□□ -0.854e-10■■□□□ 12
PRPF8Q6P2Q9 CDC42SE1-206ENST00000492796 1174 ntTSL 28.99□□□□□ -0.974e-10■■□□□ 12
PRPF8Q6P2Q9 STC2-202ENST00000518455 473 ntTSL 58.68□□□□□ -1.024e-10■■□□□ 12
PRPF8Q6P2Q9 TIMP2-202ENST00000536189 3415 ntTSL 2 BASIC8.35□□□□□ -1.074e-10■■□□□ 12
PRPF8Q6P2Q9 CDC42SE1-202ENST00000439374 3498 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.14e-10■■□□□ 12
PRPF8Q6P2Q9 TIMP2-204ENST00000586057 3389 ntTSL 1 (best) BASIC8.13□□□□□ -1.114e-10■■□□□ 12
PRPF8Q6P2Q9 CDC42SE1-207ENST00000540998 3181 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.124e-10■■□□□ 12
PRPF8Q6P2Q9 LINC01572-206ENST00000624829 1666 ntTSL 5 BASIC7.76□□□□□ -1.174e-10■■□□□ 12
PRPF8Q6P2Q9 TIMP2-203ENST00000585421 3345 ntTSL 3 BASIC7.7□□□□□ -1.184e-10■■□□□ 12
PRPF8Q6P2Q9 TCEAL4-207ENST00000469586 566 ntTSL 27.26□□□□□ -1.253e-13■■□□□ 12
PRPF8Q6P2Q9 CDC42SE1-204ENST00000483763 2379 ntTSL 1 (best)7.03□□□□□ -1.284e-10■■□□□ 12
PRPF8Q6P2Q9 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC6.89□□□□□ -1.314e-10■■□□□ 12
PRPF8Q6P2Q9 NAV2-206ENST00000525322 2716 ntTSL 26.75□□□□□ -1.335e-6■■□□□ 12
PRPF8Q6P2Q9 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.44e-10■■□□□ 12
PRPF8Q6P2Q9 SFXN5-216ENST00000484123 351 ntTSL 22.75□□□□□ -1.973e-6■■□□□ 12
Retrieved 100 of 73,762 protein–RNA pairs in 1082.2 ms