RNA–Protein interactions for RNA: ENST00000466881.1

PLOD3-211, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-211ENST00000466881 AEBP2Q6ZN18 517 aaPredicted RBP33.89■■■■□ 3.02
PLOD3-211ENST00000466881 CHIC1Q5VXU3 224 aa33.24■■■□□ 2.91
PLOD3-211ENST00000466881 PHF23Q9BUL5 403 aaPredicted RBP29.37■■■□□ 2.29
PLOD3-211ENST00000466881 SENP3Q9H4L4 574 aaPredicted RBP28.52■■■□□ 2.16
PLOD3-211ENST00000466881 NISCHQ9Y2I1 1504 aa27.41■■□□□ 1.98
PLOD3-211ENST00000466881 PLPPR3Q6T4P5 718 aa27.03■■□□□ 1.92
PLOD3-211ENST00000466881 FOXD1Q16676 465 aa26.55■■□□□ 1.84
PLOD3-211ENST00000466881 PPP6R1Q9UPN7 881 aa25.83■■□□□ 1.73
PLOD3-211ENST00000466881 ADRA2BP18089 450 aa25.76■■□□□ 1.71
PLOD3-211ENST00000466881 PIAS4Q8N2W9 510 aaPredicted RBP25.02■■□□□ 1.6
PLOD3-211ENST00000466881 MSH5O43196 834 aa24.23■■□□□ 1.47
PLOD3-211ENST00000466881 CCDC180Q9P1Z9 1646 aa23.95■■□□□ 1.42
PLOD3-211ENST00000466881 PPP4R3CPQ6ZMV5 832 aa23.9■■□□□ 1.42
PLOD3-211ENST00000466881 ABCC9O60706 1549 aa23.84■■□□□ 1.41
PLOD3-211ENST00000466881 KCNA4P22459 653 aa23.73■■□□□ 1.39
PLOD3-211ENST00000466881 SCAF1Q9H7N4 1312 aaKnown RBP23.33■■□□□ 1.33
PLOD3-211ENST00000466881 MAPK8IP2Q13387 824 aaPredicted RBP23.32■■□□□ 1.32
PLOD3-211ENST00000466881 NCBP3Q53F19 620 aaKnown RBP23.22■■□□□ 1.31
PLOD3-211ENST00000466881 CNKSR2Q8WXI2 1034 aa23.12■■□□□ 1.29
PLOD3-211ENST00000466881 NPM3O75607 178 aaKnown RBP23.06■■□□□ 1.28
PLOD3-211ENST00000466881 ZCCHC6Q5VYS8 1495 aaKnown RBP22.96■■□□□ 1.27
PLOD3-211ENST00000466881 DCAF8L2P0C7V8 631 aa22.89■■□□□ 1.25
PLOD3-211ENST00000466881 DMRT2Q9Y5R5 561 aa22.87■■□□□ 1.25
PLOD3-211ENST00000466881 DNAJC5BQ9UF47 199 aa22.81■■□□□ 1.24
PLOD3-211ENST00000466881 RNF216Q9NWF9 866 aaPredicted RBP22.63■■□□□ 1.21
PLOD3-211ENST00000466881 DCAF1Q9Y4B6 1507 aa22.62■■□□□ 1.21
PLOD3-211ENST00000466881 SLC4A1APQ9BWU0 796 aaKnown RBP22.55■■□□□ 1.2
PLOD3-211ENST00000466881 HOXD11P31277 338 aaPredicted RBP22.51■■□□□ 1.19
PLOD3-211ENST00000466881 RB1CC1Q8TDY2 1594 aa22.44■■□□□ 1.18
PLOD3-211ENST00000466881 SHROOM4Q9ULL8 1493 aa22.39■■□□□ 1.17
PLOD3-211ENST00000466881 MYO15BQ96JP2 1530 aa22.38■■□□□ 1.17
PLOD3-211ENST00000466881 NACADO15069 1562 aa22.37■■□□□ 1.17
PLOD3-211ENST00000466881 EHMT2Q96KQ7 1210 aa22.26■■□□□ 1.15
PLOD3-211ENST00000466881 SCRIBQ14160 1630 aa22.07■■□□□ 1.12
PLOD3-211ENST00000466881 PABPN1Q86U42 306 aaKnown RBP eCLIP22.05■■□□□ 1.12
PLOD3-211ENST00000466881 ZBTB22O15209 634 aa21.94■■□□□ 1.1
PLOD3-211ENST00000466881 CSRNP3Q8WYN3 585 aa21.94■■□□□ 1.1
PLOD3-211ENST00000466881 UNC13AQ9UPW8 1703 aa21.93■■□□□ 1.1
PLOD3-211ENST00000466881 SLC4A2P04920 1241 aa21.77■■□□□ 1.08
PLOD3-211ENST00000466881 BICRAQ9NZM4 1560 aa21.75■■□□□ 1.07
PLOD3-211ENST00000466881 DCAF8L1A6NGE4 600 aa21.75■■□□□ 1.07
PLOD3-211ENST00000466881 POTEDQ86YR6 584 aa21.71■■□□□ 1.07
PLOD3-211ENST00000466881 FOXD4L1Q9NU39 408 aa21.67■■□□□ 1.06
PLOD3-211ENST00000466881 CECR2Q9BXF3 1484 aa21.55■■□□□ 1.04
PLOD3-211ENST00000466881 CC2D2AQ9P2K1 1620 aa21.51■■□□□ 1.03
PLOD3-211ENST00000466881 SUPT5HO00267 1087 aaKnown RBP21.51■■□□□ 1.03
PLOD3-211ENST00000466881 DNAJC5Q9H3Z4 198 aa21.45■■□□□ 1.02
PLOD3-211ENST00000466881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.34■■□□□ 1.01
PLOD3-211ENST00000466881 EIF4G1Q04637 1599 aaKnown RBP21.31■■□□□ 1
PLOD3-211ENST00000466881 MYCNP04198 464 aaPredicted RBP21.22■□□□□ 0.99
PLOD3-211ENST00000466881 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
PLOD3-211ENST00000466881 BAZ1AQ9NRL2 1556 aaPredicted RBP21.19■□□□□ 0.98
PLOD3-211ENST00000466881 U3KPZ7 1027 aaPredicted RBP21.18■□□□□ 0.98
PLOD3-211ENST00000466881 MROH2BQ7Z745 1585 aa21.18■□□□□ 0.98
PLOD3-211ENST00000466881 SMARCA4P51532 1647 aa21.11■□□□□ 0.97
PLOD3-211ENST00000466881 WIZO95785 1651 aa21.02■□□□□ 0.95
PLOD3-211ENST00000466881 RNF39Q9H2S5 420 aa20.9■□□□□ 0.94
PLOD3-211ENST00000466881 ATXN8OSP0DMR3 200 aa20.85■□□□□ 0.93
PLOD3-211ENST00000466881 CUX2O14529 1486 aa20.81■□□□□ 0.92
PLOD3-211ENST00000466881 ATAD2BQ9ULI0 1458 aa20.8■□□□□ 0.92
PLOD3-211ENST00000466881 SMARCA2P51531 1590 aa20.8■□□□□ 0.92
PLOD3-211ENST00000466881 ATF5Q9Y2D1 282 aaPredicted RBP20.79■□□□□ 0.92
PLOD3-211ENST00000466881 PEG3Q9GZU2 1588 aa20.79■□□□□ 0.92
PLOD3-211ENST00000466881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.78■□□□□ 0.92
PLOD3-211ENST00000466881 HNRNPUL2Q1KMD3 747 aaKnown RBP20.78■□□□□ 0.92
PLOD3-211ENST00000466881 SAMD1Q6SPF0 538 aaPredicted RBP20.78■□□□□ 0.92
PLOD3-211ENST00000466881 TOP2AP11388 1531 aaKnown RBP20.78■□□□□ 0.92
PLOD3-211ENST00000466881 BAZ1BQ9UIG0 1483 aaKnown RBP20.71■□□□□ 0.91
PLOD3-211ENST00000466881 ERCC6Q03468 1493 aa20.68■□□□□ 0.9
PLOD3-211ENST00000466881 NCAPD3P42695 1498 aa20.62■□□□□ 0.89
PLOD3-211ENST00000466881 CCDC88BA6NC98 1476 aa20.58■□□□□ 0.89
PLOD3-211ENST00000466881 HMGXB3Q12766 1538 aa20.58■□□□□ 0.88
PLOD3-211ENST00000466881 C1QBPQ07021 282 aaKnown RBP20.57■□□□□ 0.88
PLOD3-211ENST00000466881 SPINK5Q9NQ38 1064 aaPredicted RBP20.52■□□□□ 0.88
PLOD3-211ENST00000466881 APLP2Q06481 763 aa20.44■□□□□ 0.86
PLOD3-211ENST00000466881 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
PLOD3-211ENST00000466881 ZNF219Q9P2Y4 722 aaPredicted RBP20.31■□□□□ 0.84
PLOD3-211ENST00000466881 NESP48681 1621 aa20.28■□□□□ 0.84
PLOD3-211ENST00000466881 CAPN15O75808 1086 aa20.28■□□□□ 0.84
PLOD3-211ENST00000466881 TRHP20396 242 aaPredicted RBP20.28■□□□□ 0.84
PLOD3-211ENST00000466881 THOC2Q8NI27 1593 aaKnown RBP20.24■□□□□ 0.83
PLOD3-211ENST00000466881 CFTRP13569 1480 aa20.13■□□□□ 0.81
PLOD3-211ENST00000466881 CADPSQ9ULU8 1353 aa20.13■□□□□ 0.81
PLOD3-211ENST00000466881 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
PLOD3-211ENST00000466881 LAMC3Q9Y6N6 1575 aa20.07■□□□□ 0.8
PLOD3-211ENST00000466881 KIF21AQ7Z4S6 1674 aa20.06■□□□□ 0.8
PLOD3-211ENST00000466881 CACNB1Q02641 598 aaPredicted RBP20.05■□□□□ 0.8
PLOD3-211ENST00000466881 POLA2Q14181 598 aa20.03■□□□□ 0.8
PLOD3-211ENST00000466881 PRDM2Q13029 1718 aa20.02■□□□□ 0.79
PLOD3-211ENST00000466881 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.79
PLOD3-211ENST00000466881 ABCB7O75027 752 aa20.01■□□□□ 0.79
PLOD3-211ENST00000466881 DSG3P32926 999 aa19.98■□□□□ 0.79
PLOD3-211ENST00000466881 PDS5BQ9NTI5 1447 aa19.96■□□□□ 0.79
PLOD3-211ENST00000466881 FANCD2Q9BXW9 1451 aa19.92■□□□□ 0.78
PLOD3-211ENST00000466881 MKRN4PQ13434 485 aaPredicted RBP19.9■□□□□ 0.78
PLOD3-211ENST00000466881 SYNJ1O43426 1573 aa19.89■□□□□ 0.77
PLOD3-211ENST00000466881 FAM9AQ8IZU1 332 aaPredicted RBP19.88■□□□□ 0.77
PLOD3-211ENST00000466881 MRC2Q9UBG0 1479 aa19.85■□□□□ 0.77
PLOD3-211ENST00000466881 TOP2BQ02880 1626 aa19.82■□□□□ 0.76
PLOD3-211ENST00000466881 CUX1P39880 1505 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms