Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CAPN6Q9Y6Q1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.3■■□□□ 1
CAPN6Q9Y6Q1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CAPN6Q9Y6Q1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.3■■□□□ 1
CAPN6Q9Y6Q1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.3■■□□□ 1
CAPN6Q9Y6Q1 AL139246.5-201ENST00000606645 996 ntBASIC21.3■■□□□ 1
CAPN6Q9Y6Q1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CAPN6Q9Y6Q1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.3■■□□□ 1
CAPN6Q9Y6Q1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.3■■□□□ 1
CAPN6Q9Y6Q1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CAPN6Q9Y6Q1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CAPN6Q9Y6Q1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.3■■□□□ 1
CAPN6Q9Y6Q1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 AC004408.2-201ENST00000623613 2777 ntBASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 FAM21FP-204ENST00000608637 956 ntBASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 AC019069.1-201ENST00000610008 1333 ntBASIC21.29■■□□□ 1
CAPN6Q9Y6Q1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.28■■□□□ 1
CAPN6Q9Y6Q1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.28■■□□□ 1
CAPN6Q9Y6Q1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CAPN6Q9Y6Q1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CAPN6Q9Y6Q1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CAPN6Q9Y6Q1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CAPN6Q9Y6Q1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.28■■□□□ 1
CAPN6Q9Y6Q1 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.28■■□□□ 1
CAPN6Q9Y6Q1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.28■■□□□ 1
CAPN6Q9Y6Q1 TERF1P2-201ENST00000583350 1212 ntBASIC21.28■■□□□ 1
CAPN6Q9Y6Q1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.28■■□□□ 1
CAPN6Q9Y6Q1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CAPN6Q9Y6Q1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CAPN6Q9Y6Q1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
CAPN6Q9Y6Q1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CAPN6Q9Y6Q1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 AC004854.2-201ENST00000608450 1441 ntBASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.27■■□□□ 1
CAPN6Q9Y6Q1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CAPN6Q9Y6Q1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CAPN6Q9Y6Q1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CAPN6Q9Y6Q1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.27■□□□□ 0.99
CAPN6Q9Y6Q1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CAPN6Q9Y6Q1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.27■□□□□ 0.99
CAPN6Q9Y6Q1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.27■□□□□ 0.99
CAPN6Q9Y6Q1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN6Q9Y6Q1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CAPN6Q9Y6Q1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN6Q9Y6Q1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN6Q9Y6Q1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CAPN6Q9Y6Q1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.26■□□□□ 0.99
CAPN6Q9Y6Q1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CAPN6Q9Y6Q1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.26■□□□□ 0.99
CAPN6Q9Y6Q1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN6Q9Y6Q1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.26■□□□□ 0.99
CAPN6Q9Y6Q1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN6Q9Y6Q1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN6Q9Y6Q1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN6Q9Y6Q1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN6Q9Y6Q1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN6Q9Y6Q1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN6Q9Y6Q1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN6Q9Y6Q1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN6Q9Y6Q1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN6Q9Y6Q1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN6Q9Y6Q1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN6Q9Y6Q1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms