Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 LINC01126-201ENST00000623515 1646 ntBASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 AC135776.1-201ENST00000319817 2481 ntBASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM4Q9UKN5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 CROCCP3-202ENST00000420820 1947 ntBASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 KRT8P33-201ENST00000508125 1423 ntBASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 SNX5-217ENST00000606557 1087 ntBASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM4Q9UKN5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.72■□□□□ 0.91
PRDM4Q9UKN5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PRDM4Q9UKN5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
PRDM4Q9UKN5 AP004607.7-201ENST00000527152 1677 ntBASIC20.7■□□□□ 0.91
PRDM4Q9UKN5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.7■□□□□ 0.91
PRDM4Q9UKN5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms