Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL13Q99616 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL13Q99616 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL13Q99616 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL13Q99616 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL13Q99616 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL13Q99616 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL13Q99616 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL13Q99616 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL13Q99616 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL13Q99616 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CCL13Q99616 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.85■□□□□ 0.29
CCL13Q99616 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL13Q99616 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL13Q99616 SMG8-203ENST00000578922 2178 ntBASIC16.85■□□□□ 0.29
CCL13Q99616 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL13Q99616 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCL13Q99616 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL13Q99616 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.85■□□□□ 0.29
CCL13Q99616 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL13Q99616 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL13Q99616 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL13Q99616 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL13Q99616 GABARAPL3-202ENST00000624044 1851 ntBASIC16.84■□□□□ 0.29
CCL13Q99616 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCL13Q99616 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL13Q99616 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL13Q99616 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL13Q99616 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL13Q99616 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.84■□□□□ 0.29
CCL13Q99616 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.84■□□□□ 0.29
CCL13Q99616 AC083880.1-201ENST00000608266 535 ntBASIC16.84■□□□□ 0.29
CCL13Q99616 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCL13Q99616 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL13Q99616 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL13Q99616 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL13Q99616 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL13Q99616 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL13Q99616 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCL13Q99616 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CCL13Q99616 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCL13Q99616 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCL13Q99616 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCL13Q99616 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL13Q99616 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL13Q99616 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
CCL13Q99616 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.83■□□□□ 0.28
CCL13Q99616 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.83■□□□□ 0.28
CCL13Q99616 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL13Q99616 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.83■□□□□ 0.28
CCL13Q99616 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCL13Q99616 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCL13Q99616 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCL13Q99616 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCL13Q99616 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL13Q99616 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.82■□□□□ 0.28
CCL13Q99616 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCL13Q99616 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCL13Q99616 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL13Q99616 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.82■□□□□ 0.28
CCL13Q99616 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCL13Q99616 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCL13Q99616 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCL13Q99616 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL13Q99616 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCL13Q99616 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCL13Q99616 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.82■□□□□ 0.28
CCL13Q99616 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCL13Q99616 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL13Q99616 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL13Q99616 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.82■□□□□ 0.28
CCL13Q99616 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.82■□□□□ 0.28
CCL13Q99616 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.82■□□□□ 0.28
CCL13Q99616 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCL13Q99616 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL13Q99616 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL13Q99616 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL13Q99616 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCL13Q99616 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL13Q99616 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL13Q99616 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCL13Q99616 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL13Q99616 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.81■□□□□ 0.28
CCL13Q99616 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL13Q99616 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL13Q99616 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCL13Q99616 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL13Q99616 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL13Q99616 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL13Q99616 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL13Q99616 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL13Q99616 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL13Q99616 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL13Q99616 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL13Q99616 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL13Q99616 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL13Q99616 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL13Q99616 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.81■□□□□ 0.28
CCL13Q99616 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CCL13Q99616 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms